G375485


Basic Information

Item Value
gene id G375485
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 19376289 ~ 19376554 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU426893
GTGTAAATGTCAATCAATGCCCTAGTCAAGAGGACTAGAGTTACTATGACAGCGCTTAGTTCATGACAGCACTTAGTCCAGATGTTGATTATGACTGTTCCCTGATTGTTGAAGTCCAAGTGCTGCATATAAATATTGTTACCTTGTCTGTCAGAGTGGCAGCAGACATCTCCTCCAGCCCCAGCTCATAGCACAGCCTCATGAACGGGGGACCAAACTTAAACTCTCCAAATGCTACGTTACTGTTCTCTTCGTGGTACCTGGAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU426893 True 266 lncRNA 0.45 1 19376289 19376554

Neighbor

gene id symbol gene type direction distance location
LOC110523377 LOC106568724 coding upstream 12200 19358271 ~ 19364089 (+)
LOC110523370 fa69b coding upstream 798061 18558152 ~ 18578228 (+)
egfl7 LOC106568866 coding upstream 870147 18487620 ~ 18506142 (+)
LOC110523366 nsa2 coding upstream 954031 18415774 ~ 18422258 (+)
LOC110523365 LOC106568911 coding upstream 966163 18396328 ~ 18410126 (+)
LOC110523383 LOC106568686 coding downstream 123050 19499604 ~ 19512291 (+)
LOC110523391 LOC106568645 coding downstream 674839 20051393 ~ 20381619 (+)
LOC110523393 LOC106568920 coding downstream 1013976 20390530 ~ 20414156 (+)
LOC110522816 LOC106568602 coding downstream 1131520 20508074 ~ 20759255 (+)
LOC110522817 LOC106568462 coding downstream 1454557 20831111 ~ 20842676 (+)
G375481 NA non-coding upstream 20171 19355874 ~ 19356118 (+)
G375477 NA non-coding upstream 22701 19353291 ~ 19353588 (+)
G375445 NA non-coding upstream 65996 19309904 ~ 19310293 (+)
G375444 NA non-coding upstream 66981 19308826 ~ 19309308 (+)
G375421 NA non-coding upstream 123045 19252927 ~ 19253244 (+)
G375486 NA non-coding downstream 892 19377446 ~ 19377709 (+)
G375488 NA non-coding downstream 2595 19379149 ~ 19379375 (+)
G375491 NA non-coding downstream 7055 19383609 ~ 19383849 (+)
G375494 NA non-coding downstream 11809 19388363 ~ 19388589 (+)
G375610 NA non-coding downstream 17648 19394202 ~ 19394536 (+)
arhgef28a LOC106568988 other upstream 1292924 18067350 ~ 18177035 (+)
G373726 NA other upstream 1668532 17704113 ~ 17707757 (+)
G372618 LOC105030512 other upstream 2494104 16870434 ~ 16882185 (+)
G372373 NA other upstream 2637789 16735642 ~ 16738500 (+)
G372281 LOC106569177 other upstream 3155356 16218328 ~ 16220933 (+)
G376320 NA other downstream 606707 19983261 ~ 19983848 (+)
G377022 NA other downstream 1214926 20591480 ~ 20596863 (+)
LOC110523400 LOC106568542 other downstream 1731615 21108129 ~ 21160149 (+)

Expression


Co-expression Network