G372373


Basic Information

Item Value
gene id G372373
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 16735642 ~ 16738500 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU423244
GTTTTTTAAAAGACTTTATCTTTTGTAGGTATAAAACAAGTTTGTAGCAAAATCCAATCAACTCAAAGTTTTTCAAAACATGACAAGAACTTCAGCATTTGTTggtcagtagctaggtttccatccaattggcaacagattttcatgcgaatactCAATGTAGATAatgaaaatatgcacatttttccATCAGTGGCATTTCCACCAAACTGACCTTTTACAGATAGAAATCTGTGTGATGacagtgcacacaaaatgtacttttttgcttacgttttcatgtaccgaataaaaaaatctaaagttccatgtatgcgtttccattgcattttcaactctaccgctAGTTGTCACAAAAATTGTAGCATTAACTTGCAAATATGCCTACCTTGTGGTTATTGGACagaagcatcaagctcatcaccataCACTtccaccaccctgtgaagttcatcataaaatttcatctgtagcctaataaaatgCATGGTTTCTTCttatcaatatttgtgcataaaggaGTTCACTGGCATTTCTCACATCATACATTTTaccaacacaaaaagatcccaccacgtcgaacaaacaaattgtctgttggcatttataaaattgtaccgaaaATTCCTGTTTCCATCACTGCTGTCTTGGTTTTTTATACActatgactttactcgcataaaaactgtggatggaaacatggttatTGCACAAGTTTCTTGTCTGCAAAAAACCCTACCCTAAAAACACACCCCTTTAAAACAGTACAAATCAACACATACCTCAAAGACTACACATCTCCCTCGAGAGACTACAACTATGGTTAcaaaatccccccccaaaaaatatgagAAACAAAATGAACATGGCTGCCCATTCCTTCCTGGTGATGTGGGAGGTCACTTCCTCTATGCAGTCTTCTGTTGGCCCTTCTTTCCAATCAGAGACTTGTGGATGTGAGGGATCACACCTCCTCCAGCGATGGTAGCCTTGATGAGCGAGTCCAATTCCTCATCTCCGCGGATGGCCAGCTGTAAGTGACGTGGAGTGATACGCTTCACCTTCAGATCCTTGGAGGCGTTCCCTGCCAACTCCAACACTTCAGCGGTGAGGTACTCCAAGATGGCGGCGCTGTAGACGGCTGCGGTGGCTCCTACTCTGCCATGGCTGGTGGTCCTGGTTTTCAGGTGTCTGTGGATACGACCCACCGGGAACTGGAGTCCAGCCCTCTGGGAGCGAGAAACAGCCTTTGCCTTAGCTTTACCACTGTCCTTTCCAGCCTTTCCTCCTGCCTGGAAGGGAAGAAACAGAAATTCAGTATATGATACATCAACTTGATAAAAACCTTTTTTTAAACTTCTCAATGCCTTGCTGAACTGTGGCCAGGATGAAAAAGACTCAATGTAGCGTTGGTGTACAAATAAATTATTAATACACTAGCATTTTCTTAATGTTATTTTTGTTTACAACTTCAAGCAACCTGTCATTACAATCACATTTATCCCGCCAATTGGAAGATAATGGACAATTTCAGGTATATAGTTTACCTAACTGTCATTTGATTTATTGAAGATGATTCATTCAAATGTTGCAAAAAGATAATAATCTAAATATGCATAAAAACGCAGTAAGAATGGTTTTAGCTATCTAAAACGGTGAAATATTGGTATgcttgtagctagctaacgttagcacagGTTTTCTTGGCTGCTCGCCAGTAGTATCTCTGCTCGCTAGGCGGATTAGTGATAACctggtttagctagctagctcggtGGAAACTTGCTACCGTAACGTTAATTCAATACACAACCCAAACTTTGCGAATATCTTGGAATATTAACATAATAAGAACCAGAAAGAGTCAGGGGATAACGTAGCCAGATATTAGATATAGTTAAGATGTGTTTGAAATAAGTATGAGAAGCGAGTCGGTTGTAAAACAGATGGCGTACTAGCTAAATGTAGATGGCGCTCTTTCGTTAGCTAGCTTTCGAGTGTCAATCGACGACGTCCTAACGTTATTTTGCACGCAAGCTTGAATTCGTGAATGCTACTTGCCCGTTTAGCATATAATTTACATTGAATCCAATTTACTATAATATGTCCTACAATACAGAGTGC
>TU423245
GTTTTTTAAAAGACTTTATCTTTTGTAGGTATAAAACAAGTTTGTAGCAAAATCCAATCAACTCAAAGTTTTTCAAAACATGACAAGAACTTCAGCATTTGTTggtcagtagctaggtttccatccaattggcaacagattttcatgcgaatactCAATGTAGATAatgaaaatatgcacatttttccATCAGTGGCATTTCCACCAAACTGACCTTTTACAGATAGAAATCTGTGTGATGacagtgcacacaaaatgtacttttttgcttacgttttcatgtaccgaataaaaaaatctaaagttccatgtatgcgtttccattgcattttcaactctaccgctAGTTGTCACAAAAATTGTAGCATTAACTTGCAAATATGCCTACCTTGTGGTTATTGGACagaagcatcaagctcatcaccataCACTtccaccaccctgtgaagttcatcataaaatttcatctgtagcctaataaaatgCATGGTTTCTTCttatcaatatttgtgcataaaggaGTTCACTGGCATTTCTCACATCATACATTTTaccaacacaaaaagatcccaccacgtcgaacaaacaaattgtctgttggcatttataaaattgtaccgaaaATTCCTGTTTCCATCACTGCTGTCTTGGTTTTTTATACActatgactttactcgcataaaaactgtggatggaaacatggttatTGCACAAGTTTCTTGTCTGCAAAAAACCCTACCCTAAAAACACACCCCTTTAAAACAGTACAAATCAACACATACCTCAAAGACTACACATCTCCCTCGAGAGACTACAACTATGGTTAcaaaatccccccccaaaaaatatgagAAACAAAATGAACATGGCTGCCCATTCCTTCCTGGTGATGTGGGAGGTCACTTCCTCTATGCAGTCTTCTGTTGGCCCTTCTTTCCAATCAGAGACTTGTGGATGTGAGGGATCACACCTCCTCCAGCGATGGTAGCCTTGATGAGCGAGTCCAATTCCTCATCTCCGCGGATGGCCAGCTGTAAGTGACGTGGAGTGATACGCTTCACCTTCAGATCCTTGGAGGCGTTCCCTGCCAACTCCAACACTTCAGCGGTGAGGTACTCCAAGATGGCGGCGCTGTAGACGGCTGCGGTGGCTCCTACTCTGCCATGGCTGGTGGTCCTGGTTTTCAGGTGTCTGTGGATACGACCCACCGGGAACTGGAGTCCAGCCCTCTGGGAGCGAGAAACAGCCTTTGCCTTAGCTTTACCACTGTCCTTTCCAGCCTTTCCTCCTGCCATGTCGCGGGTGACTTTTCCCTGTTCTATTTCGAAACGGAGAGAAACAATAAACCACGAAGCAACGCCAAGCGGATGAATGAGGATTCCTCGAGCTTCCAGAGCCAACCAATAGCTTTTCTGCTTGCTGGTTCGAACGGTCTCTTCAACCAATTGCAATCGTGTTTGTACAGTGTTTACTCATTCCTGCAACTGTATTGGACGTTTTGGGATAGTAGAAAACACCAGAGAAATACTACCg

Function

NR:

description
PREDICTED: histone H2A.V

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU423244 False 2124 lncRNA 0.40 4 16735642 16738220
TU423245 True 1533 TUCP 0.43 5 16735642 16738500

Neighbor

gene id symbol gene type direction distance location
ved LOC106569620 coding upstream 513 16732636 ~ 16735129 (+)
polm LOC106569276 coding upstream 9633 16712182 ~ 16726009 (+)
LOC110523336 NA coding upstream 42212 16690905 ~ 16694551 (+)
pargl LOC106569224 coding upstream 177937 16516800 ~ 16557705 (+)
LOC110523327 LOC105015301 coding upstream 265300 16454595 ~ 16470342 (+)
purbb LOC106562912 coding downstream 3133 16741353 ~ 16744067 (+)
LOC110523342 LOC106569363 coding downstream 211182 16949402 ~ 16967809 (+)
st8sia5 st8sia5 coding downstream 257174 16995394 ~ 17012011 (+)
LOC110522812 loxhd1 coding downstream 281367 17019587 ~ 17071539 (+)
atp5fa1 LOC106569424 coding downstream 381567 17119787 ~ 17125777 (+)
G372513 NA non-coding upstream 46657 16624136 ~ 16688985 (+)
G372507 LOC106569240 non-coding upstream 73146 16609896 ~ 16662496 (+)
G372518 NA non-coding upstream 95747 16637303 ~ 16639895 (+)
G372506 NA non-coding upstream 125865 16609502 ~ 16609777 (+)
G372560 NA non-coding downstream 13024 16751244 ~ 16752267 (+)
G372570 NA non-coding downstream 33190 16771410 ~ 16773528 (+)
G372589 NA non-coding downstream 71711 16809931 ~ 16810186 (+)
G372597 NA non-coding downstream 84808 16823028 ~ 16823918 (+)
G372599 NA non-coding downstream 88772 16826992 ~ 16827246 (+)
G372281 LOC106569177 other upstream 514709 16218328 ~ 16220933 (+)
G371615 LOC100194725 other upstream 940520 15791559 ~ 15795122 (+)
G371182 NA other upstream 1606825 15124290 ~ 15128817 (+)
LOC110519479 LOC106596183 other upstream 1682086 15047739 ~ 15054353 (+)
LOC118964542 LOC106569496 other upstream 1930171 14798616 ~ 14805526 (+)
G372618 LOC105030512 other downstream 132214 16870434 ~ 16882185 (+)
G373726 NA other downstream 965893 17704113 ~ 17707757 (+)
arhgef28a LOC106568988 other downstream 1329223 18067350 ~ 18177035 (+)
G376320 NA other downstream 3245041 19983261 ~ 19983848 (+)
G377022 NA other downstream 3853260 20591480 ~ 20596863 (+)

Expression


Co-expression Network