polm (LOC106569276)


Basic Information

Item Value
gene id polm
gene name LOC106569276
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 16712182 ~ 16726009 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036976935.1
AGAAGGTGGTTGTCCAACATTGACTTGATGAGACATGTATGTCATCGTGGTAGCAAGACAGCagcacacttttttttatttaaccatgcaagtcagttaagaacaaaatattatttacggcctaccccggacgacgctgggccaattgtgcgccgcccaatgggactcccaatcacggccggatgtgatacagcctggatttgaaccagggacctcttgcactgagatgcagctgCGCCAGTCGGGAACCCAAGATACTggtcaattaaattcaaggggctttattggcatgggaaacgtgttaacattgcatAACATTAAATTGTCACTAtccgtacagtaggtggcggctaTACATCAATAGGCGTAGTCTGCCATAAAACCTtaaggaagaagaagaagcacaCTCGCGAGAATTATGAACCGTTGCTCATGTATCTGTTGTCGGTTTTATAGACAGATGAGCGAGTCTGCCAACAAATATGGTCCCTCTAAAGCGCAGGAAAGTGAACTGCTCCGTTACAAGCGACAGCAGCGGTGACAGGACCAGCAAGTTTCCCGGGGTTGTCATCTATCTCctggagagaaagatgggagcCAGTCGGAGAGCCTTCCTCACTCGGCTCGGCCGGGGGAAAGGTTTCAACATAGAATACTCCTTAAGCTGTTCCATCACTCATATCGTGTCCGAGAATAATTCTGGGGAGGAAGTCCGGACTTGGCTGGACCTCCAGactggaggacaggggagagaagggggagaaggcaGGACAGCCCGACCTGGTTCAGTCCATCTCCTGGACATCGTTTGGTACACAGAGAGCATGCATGCTGGCATTCCCGTGATTATACTGGACAGACACAGACTACAGgagagagagaagcctgGTTTGGAGCTGGCAGTGGTCTCAGTACCCAGCTATGCCTGTCAGAGACACACCCCTCTACTGCACCACAACATAACACTGACCGATGCGTTGTCCATACTGGCTGAGAATGCGGAGCTCGGTGAAAACGAGGGACGGGGAGTGGCGTTCCGTAGGGCGGCAGCCTTGTTGAAGTCCCTCCCCCAGGAGGTCAGAGGGGCAGAGCAACTACGAGGACTGCCTTGTCTGGGGGAGCACTCACTCAGAGTCATCAAGGAGGTTCTGGAGGATGGTGTATCTCATGAGGTGGAGACCACCACGCATTCAGAACAGTTTAAGGCCATGAAGTGTGTGTTTCAGGCCCTAACAGGTATTTTCGGGGTAGGGGCGAAGACAGCCGACCGTTGGTTCAAGGAGGGAATACACACCCCCTCCGACCTGCAAAGATCAGGACACACACTCAACAGAGCGCAacgagcagGTCTGCAATATTATGACGAACTGAACCTGCCTGTCACAAAATCAGAGGCTGTTGCAATTGGTCAGATTGTGGAGAGGGCGGTCCATGCTGTGCTCCCGGGGGCAGAGATCACTCTGATTGGAGGATTCAGGAGAGGTAAGCAGACTGGTCATGATGTGGACTTCTTGATAACCCATCCTGAcgagggcagagaggaggggcTCATGCCTAAGGTGGTGTCCTGGCTTGAagcacagGGCTTCCTGTTGTACCAGAAGACCACTGGGAACTCTTATCTGGAGAGCAAAGAGGGTCCTGCGAGGCCAGCCTCTAACATGGACCGCTTTGAAAGATGCTTCTCCATCTTTAGACTGAGCACAGACAACGAAGGGAGGGAGATCCAGACGGGGAATGGTCCACAGACATACTCACCGACACTGACCAATACAGATCCACACACCCACTCCGAGTCTCCTCACCCACTTCCCCAGACCCTTGTGGTGGTGGGTGACCATGCCCAGAAGGTGAGCTGGGTGCTGGGTCATTCTCAGTGCTCAGGTCCCCGGTCCTGGAGAGCAGTGAGGGTAGACCTGGTGGTCTCTCCATACAGCCAGTTTCCCTTCGCATTGCTGGGCTGGACTGGATCGAAGtTGTTTGAGAGAGAGCTGCGTCGCTGGGCAGTACATGAGAAGGCCATGACTCTGAGCAGCCATGCTCTGTACGACAGAAAACGGACGCTGTATCTAAGGGCTAGTTCAGAGGAGGAGATCTTTGCTCATCTGGGTCTGGAATATATCCCTCCCTGTGACCGGAACGCTTGACGACAACATCCTGGACTGATAACAGATACAGTCTAAGAGCTAAGCAAACCCACGCTAAATTAAACCTAAACATAAGCCAAATCAAACTAAGCCTTATCCCGAGAACAACACACAGGCCAGATACAGCCTAGGGTAGACAAGAAGGGGGGGGTGAGAGGTGGATAGACGGTTACATATCTGTATTTTATTAAATTGTAAATAATAAAAAACATACAGACCCAGGATGTTGTAAAGTACCAAATCTATAGATGTGTTTAATTTAGTTAACTAAATTAAAATAACGTAACTACTCGAGCCATTAATTGTACAGTATGTGCTTTTTTTTCATATCTGACATAGATCATAGATCATTTTCTTTCATTGGTGCCTTCTTATTGAATACGTTTTTAATATTTACTGCAATTTGTCTGCTTGTTTGTAATATTTAGAATGCAGTTAAACTATGTGAATTAAAATGATATCAATCATTTTAGACTTACCAAAAAGCTTTTGAAATGTGACATAATGTAGGCCTAAAACTGCGTGCATTCTGAGGGATGCTTAAATAAGTGCTTAAATATATGCATGCCCTCATgcagtgtgtgtggttttgttACATTTTGCATGATGACAGCAGTGGCCTATTTACACAGCAGGTGtacgctacacacacaccaccatccaACTTACGGTCTCAGAAATAGAAACATTAGGTACAAAATACGTTTTTAAAAATGGCAAAAAATGACACACACGTAGCATAATTGGTTAGGGgatcgtaaaacggcagccatctccttcggcgcaggtgacaaataaaatgGGACTCTATTACCTCTCATGACATGTTTGTACATtgctatatgtatatacagtgtaccATGTTATATATTATCAATTTATGCATTGTGGTGGTTTCTGTGTGTACTCTTGTTTTTAGTTGACAGAAATAAAACTCCCCTATTATTGAATGAGGA
>XM_036976936.1
AAGGTGGTTGTCCAACATTGACTTGATGAGACATGTATGTCATCGTGGTAGCAAGACAGCagcacacttttttttatttaaccatgcaagtcagttaagaacaaaatattatttacggcctaccccggacgacgctgggccaattgtgcgccgcccaatgggactcccaatcacggccggatgtgatacagcctggatttgaaccagggacctcttgcactgagatgcagctgCGCCAGTCGGGAACCCAAGATACTggtcaattaaattcaaggggctttattggcatgggaaacgtgttaacattgcatAACATTAAATTGTCACTAtccgtacagtaggtggcggctaTACATCAATAGGCGTAGTCTGCCATAAAACCTtaaggaagaagaagaagcacaCTCGCGAGAATTATGAACCGTTGCTCATGTATCTGTTGTCGGTTTTATAGACAGATGAGCGAGTCTGCCAACAAATATGGTCCCTCTAAAGCGCAGGAAAGTGAACTGCTCCGTTACAAGCGACAGCAGCGGTGACAGGACCAGCAAGTTTCCCGGGGTTGTCATCTATCTCctggagagaaagatgggagcCAGTCGGAGAGCCTTCCTCACTCGGCTCGGCCGGGGGAAAGGTTTCAACATAGAATACTCCTTAAGCTGTTCCATCACTCATATCGTGTCCGAGAATAATTCTGGGGAGGAAGTCCGGACTTGGCTGGACCTCCAGactggaggacaggggagagaagggggagaaggcaGGACAGCCCGACCTGGTTCAGTCCATCTCCTGGACATCGTTTGGTACACAGAGAGCATGCATGCTGGCATTCCCGTGATTATACTGGACAGACACAGACTACAGgagagagagaagcctgGTTTGGAGCTGGCAGTGGTCTCAGTACCCAGCTATGCCTGTCAGAGACACACCCCTCTACTGCACCACAACATAACACTGACCGATGCGTTGTCCATACTGGCTGAGAATGCGGAGCTCGGTGAAAACGAGGGACGGGGAGTGGCGTTCCGTAGGGCGGCAGCCTTGTTGAAGTCCCTCCCCCAGGAGGTCAGAGGGGCAGAGCAACTACGAGGACTGCCTTGTCTGGGGGAGCACTCACTCAGAGTCATCAAGGAGGTTCTGGAGGATGGTGTATCTCATGAGGTGGAGACCACCACGCATTCAGAACAGTTTAAGGCCATGAAGGCCCTAACAGGTATTTTCGGGGTAGGGGCGAAGACAGCCGACCGTTGGTTCAAGGAGGGAATACACACCCCCTCCGACCTGCAAAGATCAGGACACACACTCAACAGAGCGCAacgagcagGTCTGCAATATTATGACGAACTGAACCTGCCTGTCACAAAATCAGAGGCTGTTGCAATTGGTCAGATTGTGGAGAGGGCGGTCCATGCTGTGCTCCCGGGGGCAGAGATCACTCTGATTGGAGGATTCAGGAGAGGTAAGCAGACTGGTCATGATGTGGACTTCTTGATAACCCATCCTGAcgagggcagagaggaggggcTCATGCCTAAGGTGGTGTCCTGGCTTGAagcacagGGCTTCCTGTTGTACCAGAAGACCACTGGGAACTCTTATCTGGAGAGCAAAGAGGGTCCTGCGAGGCCAGCCTCTAACATGGACCGCTTTGAAAGATGCTTCTCCATCTTTAGACTGAGCACAGACAACGAAGGGAGGGAGATCCAGACGGGGAATGGTCCACAGACATACTCACCGACACTGACCAATACAGATCCACACACCCACTCCGAGTCTCCTCACCCACTTCCCCAGACCCTTGTGGTGGTGGGTGACCATGCCCAGAAGGTGAGCTGGGTGCTGGGTCATTCTCAGTGCTCAGGTCCCCGGTCCTGGAGAGCAGTGAGGGTAGACCTGGTGGTCTCTCCATACAGCCAGTTTCCCTTCGCATTGCTGGGCTGGACTGGATCGAAGtTGTTTGAGAGAGAGCTGCGTCGCTGGGCAGTACATGAGAAGGCCATGACTCTGAGCAGCCATGCTCTGTACGACAGAAAACGGACGCTGTATCTAAGGGCTAGTTCAGAGGAGGAGATCTTTGCTCATCTGGGTCTGGAATATATCCCTCCCTGTGACCGGAACGCTTGACGACAACATCCTGGACTGATAACAGATACAGTCTAAGAGCTAAGCAAACCCACGCTAAATTAAACCTAAACATAAGCCAAATCAAACTAAGCCTTATCCCGAGAACAACACACAGGCCAGATACAGCCTAGGGTAGACAAGAAGGGGGGGGTGAGAGGTGGATAGACGGTTACATATCTGTATTTTATTAAATTGTAAATAATAAAAAACATACAGACCCAGGATGTTGTAAAGTACCAAATCTATAGATGTGTTTAATTTAGTTAACTAAATTAAAATAACGTAACTACTCGAGCCATTAATTGTACAGTATGTGCTTTTTTTTCATATCTGACATAGATCATAGATCATTTTCTTTCATTGGTGCCTTCTTATTGAATACGTTTTTAATATTTACTGCAATTTGTCTGCTTGTTTGTAATATTTAGAATGCAGTTAAACTATGTGAATTAAAATGATATCAATCATTTTAGACTTACCAAAAAGCTTTTGAAATGTGACATAATGTAGGCCTAAAACTGCGTGCATTCTGAGGGATGCTTAAATAAGTGCTTAAATATATGCATGCCCTCATgcagtgtgtgtggttttgttACATTTTGCATGATGACAGCAGTGGCCTATTTACACAGCAGGTGtacgctacacacacaccaccatccaACTTACGGTCTCAGAAATAGAAACATTAGGTACAAAATACGTTTTTAAAAATGGCAAAAAATGACACACACGTAGCATAATTGGTTAGGGgatcgtaaaacggcagccatctccttcggcgcaggtgacaaataaaatgGGACTCTATTACCTCTCATGACATGTTTGTACATtgctatatgtatatacagtgtaccATGTTATATATTATCAATTTATGCATTGTGGTGGTTTCTGTGTGTACTCTTGTTTTTAGTTGACAGAAATAAAACTCCCCTATTATTGAATGAGGA

Function

NR:

description
DNA-directed DNA/RNA polymerase mu-like

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016779 nucleotidyltransferase activity molecular_function

KEGG:

id description
K03513 POLM; DNA polymerase mu

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036976935.1 False 3103 mRNA 0.47 11 16712182 16726009
XM_036976936.1 True 3089 mRNA 0.47 11 16712184 16726009

Neighbor

gene id symbol gene type direction distance location
LOC110523336 NA coding upstream 18752 16690905 ~ 16694551 (+)
pargl LOC106569224 coding upstream 154477 16516800 ~ 16557705 (+)
LOC110523327 LOC105015301 coding upstream 241840 16454595 ~ 16470342 (+)
LOC110523326 dusp26 coding upstream 274450 16434263 ~ 16437732 (+)
ptges ptges coding upstream 853822 15852569 ~ 15858360 (+)
ved LOC106569620 coding downstream 6627 16732636 ~ 16735129 (+)
purbb LOC106562912 coding downstream 15344 16741353 ~ 16744067 (+)
LOC110523342 LOC106569363 coding downstream 223393 16949402 ~ 16967809 (+)
st8sia5 st8sia5 coding downstream 269385 16995394 ~ 17012011 (+)
LOC110522812 loxhd1 coding downstream 293578 17019587 ~ 17071539 (+)
G372513 NA non-coding upstream 23197 16624136 ~ 16688985 (+)
G372507 LOC106569240 non-coding upstream 49686 16609896 ~ 16662496 (+)
G372518 NA non-coding upstream 72287 16637303 ~ 16639895 (+)
G372506 NA non-coding upstream 102405 16609502 ~ 16609777 (+)
G372373 NA non-coding downstream 9633 16735642 ~ 16738500 (+)
G372560 NA non-coding downstream 25235 16751244 ~ 16752267 (+)
G372570 NA non-coding downstream 45401 16771410 ~ 16773528 (+)
G372589 NA non-coding downstream 83922 16809931 ~ 16810186 (+)
G372597 NA non-coding downstream 97019 16823028 ~ 16823918 (+)
G372281 LOC106569177 other upstream 491249 16218328 ~ 16220933 (+)
G371615 LOC100194725 other upstream 917060 15791559 ~ 15795122 (+)
G371182 NA other upstream 1583365 15124290 ~ 15128817 (+)
LOC110519479 LOC106596183 other upstream 1658626 15047739 ~ 15054353 (+)
LOC118964542 LOC106569496 other upstream 1906711 14798616 ~ 14805526 (+)
G372618 LOC105030512 other downstream 144425 16870434 ~ 16882185 (+)
G373726 NA other downstream 978104 17704113 ~ 17707757 (+)
arhgef28a LOC106568988 other downstream 1341434 18067350 ~ 18177035 (+)
G376320 NA other downstream 3257252 19983261 ~ 19983848 (+)

Expression


Co-expression Network