LOC110523342 (LOC106569363)


Basic Information

Item Value
gene id LOC110523342
gene name LOC106569363
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 16949402 ~ 16967809 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021601959.2
ATGAGTACCGACGCAGAGATGGCTTCTTATGGCAAAGCCGGTGTATACCTCCGTAAGCCTGAGAAGGAGAGGATTGAGGCCCAAAGCCAGCCCTTCGATGCAAAGAATGCCTGCTATGTGACCGATGTTAAGGAGCTGTACCTCAAGGGTACCATTGTTGGCAGAGAAGGGGGAAAGGTCCAAGTGAAAGTCCTTGACACTGGGGAGACTAATGACTTCAAAGAAGCCGATGTCTTCGAAATGAACCCTCCAAAGTTTGACATGATTGAGGACATGGCCATGATGACCTACCTCAATGAAGCCACTGTCCTGTATAACCTCAAAGAGCGTTATGCAGCATGGATGATCTACACCTACTCTGGGCTCTTCTGTGCCACGGTGAATCCCTACAAGTGGCTCCCTGTGTATGACGAAGAGGTTGTTAACGCTTACAGAGGAAAGAAGCGCATGGAGGCTCCACCCCAtatcttctctgtctctgacagGGCCTATCAGTTCATGTTGACGGATAGGGAGAACCAGTCTATCCTGATTACCGGAGAATCTGGTGCAGGAAAGACTGTCAACACCAAGCGTGTCATCCAATACTTTGCCACCATTGCTGTGtctggaggagaaagaaagagggcgGCAGAACCCGGCAAAATGCAGGGGTCTCTTGAAGATCAGATTATTGCTGCCAACCCTCTGCTGGAGGCTTACGGTAATGCCAAGACAGTTCGAAACGACAACTCTTCTCGTTTTGGTAAATTCATCAGGATTCACTTCCACAGTAATGGCAAGCTGTCTAGTGCTGACATTGAGACCTACCTGCTGGAGAAGTCCAGAGTGACCTTCCAGCTGCCCGATGAGAGAAGCTACCACATATTCTACCAGATGATGACCAACCACAAGCCTGAGCTGATTGAAATGACGCTCATCACCACCAACCCCTACGACTTCCCCATGATCAGCCAGGGGCAGATAAAAGTGGCCTCTATCGATGACAAAGAGGAGCTGGATGCCACAGATGCCGCCATTGACATCCTGGGCTTCACCAATGATGAGAAGATAGGCATCTACAAGCTGACCGGCGCTGTCATGCACCACGGCAACTTACGTTTCAAGCAGAAGCAGCGGGAGGAGCAGGCCGAGCCAGACGGCACAGAGGTAGCTGATAAAATCGGTTACCTCTTGGGTCTGAACTCAGCTGACATGCTGAAACTTCTGTGCTACCCCAGAGTGAAGGTTGGCAATGAGTTTGTGACCAAGGGACAGACCGTGCCTCAGGTGTATAACTCTGTGAGCGCTCTGGCCAAGTCCATCTATGAGCGGATGTTCTTGTGGATGGTCATCCGTATCAATCAGATGTTGGACACCAAGCAACAAAGGAACTTCTACATCGGTGTGCTCGACATTGCTGGGTTTGAGATCTTTGATTTCAACACCATGGAGCAGCTGTGTATCAACTTCACCAATGAGAAACTGCAACAGTTCTTCAACCATCACATGTTTGTCCTGGAGCAAGAGGAGTACAAGAAGGAGGGAATCATCTGGGAGTTCATTGATTTCGGCATGGACTTGGCTGCCTGCATTGAGCTTATTGAGAAGCCAATGGGCATCTTCTCCATCCTTGAAGAGGAGTGCATGTTCCCCAAGGCTTCAGACACTTCCTTCAAGAACAAGCTGTATGACCAGCATATGGGCAAGAAAAACACTTTCCAGAAGCCCAAGCCTGCCAAGGGAAAGGCTGAGGCCCACTTCTCCTTGGTGCACTACGCTGGCATTGTGGACTACAACATCTGTGGCTGGCTGGACAAGAATAAGGACCCCCTGAATGACTCAGTGGTGCAGCTCTACCAGAAGTCTTCAGTCAAACTGCTGGTTCTTATCTACGTTGATTCTCCAGCTGAAGACAGAGCATCCAAGAAGGGAGGCAAGAAAAAGGGAGGCTCCATGCAGACAGTGTCTTCCCAGTTCAGGGAGAACTTGGGCAAGCTGATGACCAACTTGAGGAGCACTCACCCTCACTTTGTGCGCTGTCTGATCCCCAATGATTCAAAGACTCCAGgTCTGATGGAGAACTTCCTGGTTATCCACCAGCTAAGGTGTAACGGTGTACTGGAGGGTATCAGGATCTGTAGAAAGGGGTTCCCCAGCAGAATCTCCTACAGTGACTTCAAGCAGAGGTACAAAGTACTGAATCCCAGTGTTATCCCAGAAGGAACATTTATGGACAACAAGAAGGCTTCTGAGAATCTGCTTGGGTCAATCAATGTGGCGCACGAGCAgtacaagtttggacacaccaagGTGTTCTTCAAAGCTGGTCTGCTGGGTGTCCTGGAGGAGATGCGAGACGAGAGACTGGCCTCTCTGGTCTGCATGATACAGTCTTTGTGTCGTGGGTTCGCCATGAGGAAGGAGTTTGTGAAGATGATGGAGCGGAGAGAGGCTGTCTTCACCATCAAATACAACATTCGCTCATTCATGAATGTTAAACACTGGCCATGGATGAAGGTGTATTACAAGATCAAGCCACTGCTGAAGAGTGCTGAGACTGAGAAGGAGCTAGCCAACATGAAGGAGGACATTGAGAAGTGCAAAATCGCCCTGACCAAGGCTGAGGCCCGCAAGACAGAGCTTGAGGAGAAGATGGTGACCGTTCTGCAGGAGAGGAATGACCTGACGCTCCAAGTTGCATCTGAATCAGAGAATCTGACTGATGCTGAGGAGAGGTGCGAGGGGCTGATCAAGAGCAAGATCCAGCTGGAGGCCAAACTCAAAGAGACGACCGAAAGgctagaggatgaggaggagatgaaTGCTGAGCTGACCTCCAAGAAGAGGAAGCTGGAGGATGAGTGTTTGGAGTTGAAGAAGGACATTGATGACCTGGAGCTCACCCTGGCCAAAGTGGAGAAGGAGAAACACGCCACTGAAAACAAGGTCAAAAATCTGACTGAGGAGATGGCCTCTCAAGATGAGAGCGTTGCCAAGCTGACCAAGGAGAAAAAAGCCCTCCAAGAGGCCCAACAACAGACACTGGACgacctgcaggcagaggaggacaAAGTCAACACTCTGACCAAGGCCAAGGCCAAGCTGGAACAGCAAGTTGATGACCTTGAGGCTTCTCTGGAGCAAGAGAAGAGGCTCCGTATGGACTTTGAGAGAGCCAAGAGAAAGCTGGAGGGAGACCTGAAACTAGCCCAGGAATCCATAATGGACCTGGAGAATGACAAGCAGCAGTCTGAAGAAAAGATCAAAAAGAAGGACTTTGAGACCAGCCAGCTCCTCAGCATGATTGAGGATGAGCAGTCTCTGGGTGGTCAGCTGCAGAAGAAAATCAAGGAACTCCAGGCTCGTattgaggagatggaggaggatatTGAGGCTGAGCATTCTGCCAGGGCAAAGGTTGAGAAGCAGAGGGCCGATCTCTCCAGGGAACTTGAGGAGATCAGTGATAGGCTGGAGGAAGCTGGTGGAGCCACTGCTGCTCAGATCGAGATGAACAAGAAGCGCGAGGCTGAGTTCCAGAAACTGAGACGCGACCTCGAGGAGTCGACCCTGCAGCACGAGGCCACAGCCGCAGTCCTGAGGAAGAAGCAGGCTGACAGTGTGGCGGAGCTCGGAGAGCAGATCGACAACCTGCAGCGCGTTAAGCAGAaactggagaaggagaagagcgaGTACAAGATGGAGATCGATGACCTCTCCAGCAACATGGAGGCTGTCACCAAGACTAAGGGCAATCTGGAGAAGATGTGCCGTACTATTGAGGATCAGCTGAGTGAGCTCAAGACTGGGAACGATGAGAACCTTCGCCAAATCAACGACATCAGTGGACAGAGGGCCAGACTCCTGACTGAGAACGGTGAGTTTGGACGCCAGCTGGAAGAGAAGGGAGCTCTGGTGTTTCAGCTGACCAGAGTCAAGCAGGCCTTCACACAGCAGGTGGAGGAGCTAAAGAGGCAGATTGAGGAGGAGGTCAAAGCTAAGAATTCCCTGGCCCATGGTGTCCAGTCTGCCCGCCATGACTGTGACCTTCTGAGGGAGCAGTTTGAGTTGGAGCAAGAGGCCAAGgcagaactgcaacgctgcatgTCTAAGGCCAACAGCGAGGTGGCTCAGTGGAGGACCAAGTATGAGACGGATGCCATCCAGCGCACAGAGGAGCTTGAGGAGGCCAAGAAGAAGCTGGCGCAGCGTCTGCAGGACGCTGAGGAAATGATTGAGGCAACCAACTCAAAGTGTGCTTCGCTGGAGAAGACCAAGCAAAGGCtgttgggagaggtggaggacatCATGATTGATGTAGAGAGGGCCAACGCTATGGCTGGCAACCTTGATAAGAAGCAGAGAAACTTCGACAAGGTTCTGGCTGAGTGGAAGCAGAAGTATGAGGTGGGCCAGGCGGAACTGGAAGGAGCTCAGAAGGAGGCTCGTTCTATGAGCACAGAGCTCTTCAAGATGAAGAACTCCTATGAGGAGGCTCTGGATCAGCTGGAGActctgaagagagagaacaagaacctCCAACAGGAGATCTCTGACCTGACTGAACAGATCGGAGAGACAAGCAAGAACATCCATGAGCTGGAAAAGGCCAAGAAGACTGTAGAGATGGAGAACTCTGAGATCCAGACTGCTCTGGAGGAGGCTGAAGGAACACTGGAGCACGAGGAATCCAAGATTCTGCGTGTGCAGCTGGAGCTGAACCAGATCAAGGGTGAGGTGGACAGGAAGCTGGCAGAGAAGGACGAGGAGATGGAGCAGATCAAGAGGAACAGCCAGCGGATTATAGAATCCATGCAGAACACACTGGACTCTGAGGTCCGCAGCAGGAGCGACGCCCTGAGGGTGAAgaagaagatggatggagacCTGAATGAGATGGAGATGCAGCTGAGTCACGCCAATAGACAGGCCACTGAGGCCACGAAACAGCTGAGAAATGTCCAGGGACAACTTAAGGATGCCCAAATTCTCCTTGATGACGCTGTCCGTGAGTCAGAAGACATGAAGGAGCAGGCCGCCATGGTGGAACGCAGGAACGGTCTGATGATGACAGAGATTGAGGAGCTGAGGACTGctctggagcagactgagagagGCCGCAAAGTGGCTGAGCAAGAGCTGGTGGACGCCAGTGAGCGTGTGGGACTGCTCCACTCTCAGAACACCAACCTTCTGAACACTAAGAAGAAGCTGGAGGCTGACCTGGTGCAGGTGCAAGGTGAGGTGGACGACATCATCCACGAGGCCAGAAACGCAGAAGAGAAGGCCAAGAAGGCCATCACTGATGCGGCCATGATGGCtgaggagctgaagaaggagcaggACACCAGTTCTCACCtggagaggatgaagaagaacctGGAGGTCACAGTCAAGGACCTGCAGCACCGTCTGGATGAGGCTGAGAATCTGGCCATGAAGGGAGGCAAGAAGCAGCTCCAGAAACTGGAGTCCAGGGTACGTGAGCTGGAGGCTGAGGTGGAGTCCGAGCAGAGAAGAGGTGTAGACGCAGTTAAGGGAGTCCGGAAGTACGAGCGCAGAGTCAAGGAGCTCACATACCAAACTGAGGAGGACAATAAGAATATTATCAGACTTCAGGATCTAGTAGAAAAGCTGCAGCTTAAAGTGAAGGCCTACAAGAGGCAGGCTGAGGAAGCGGAGGAACAAGCCAACCAGCACATGTCTAAGTTCCGTAAGGTTCAGCATGAGCTGGAGGAGGCTGAGGAACGCGCTGACATTGCAGAGACCCAGGTCAACAAGCTCAGAGTCAAGAGCCGTGACTCTGGAAAGGCCAAAGAAGAGTAAacctattttattttaaatagagAACTTGGACTGAACAATTCTTAAGACAGCCTTACATTATTCTAGCTACTACAAGGCAAAGAAACCAGGCCAGGGGCTGGGTGGTCAGTGGGGGTACtggttttttgttattttttctcCTTGTCATttgttttttgtgttttgttgtcCATTTTATTTTGATgcatgttgttgtggttgtcttGTGTGTAAAAGGGGTAGCCCACAAATTGTTTTGGGAACTTGTTTACACTGTTGTATGCTCCTtaataaaacatatttgaaaTGTAAAAACATATGTACAGTA

Function

NR:

description
myosin heavy chain, fast skeletal muscle-like

GO: NA

KEGG:

id description
K24220 MYH1s; myosin heavy chain 1/2/3/4/8/13/7B/15

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021601959.2 True 6115 mRNA 0.51 39 16949402 16967809

Neighbor

gene id symbol gene type direction distance location
purbb LOC106562912 coding upstream 205335 16741353 ~ 16744067 (+)
ved LOC106569620 coding upstream 214273 16732636 ~ 16735129 (+)
polm LOC106569276 coding upstream 223393 16712182 ~ 16726009 (+)
LOC110523336 NA coding upstream 255972 16690905 ~ 16694551 (+)
pargl LOC106569224 coding upstream 391697 16516800 ~ 16557705 (+)
st8sia5 st8sia5 coding downstream 27585 16995394 ~ 17012011 (+)
LOC110522812 loxhd1 coding downstream 51778 17019587 ~ 17071539 (+)
atp5fa1 LOC106569424 coding downstream 151978 17119787 ~ 17125777 (+)
LOC100136246 LOC106569430 coding downstream 158547 17126356 ~ 17147778 (+)
LOC110523352 LOC106569472 coding downstream 223607 17191416 ~ 17217186 (+)
G372621 LOC106569151 non-coding upstream 80338 16868670 ~ 16869064 (+)
G372617 NA non-coding upstream 82898 16866270 ~ 16866504 (+)
G372612 NA non-coding upstream 93919 16855129 ~ 16855483 (+)
G372610 NA non-coding upstream 94952 16854229 ~ 16854450 (+)
G372606 NA non-coding upstream 108368 16840489 ~ 16841034 (+)
G372676 NA non-coding downstream 19390 16987199 ~ 16987399 (+)
G372680 NA non-coding downstream 23003 16990812 ~ 16991929 (+)
G372683 NA non-coding downstream 29207 16997016 ~ 16998461 (+)
G372684 NA non-coding downstream 36575 17004384 ~ 17005069 (+)
G372685 NA non-coding downstream 48591 17016400 ~ 17016603 (+)
G372618 LOC105030512 other upstream 67217 16870434 ~ 16882185 (+)
G372373 NA other upstream 210902 16735642 ~ 16738500 (+)
G372281 LOC106569177 other upstream 728469 16218328 ~ 16220933 (+)
G371615 LOC100194725 other upstream 1154280 15791559 ~ 15795122 (+)
G371182 NA other upstream 1820585 15124290 ~ 15128817 (+)
G373726 NA other downstream 736304 17704113 ~ 17707757 (+)
arhgef28a LOC106568988 other downstream 1099634 18067350 ~ 18177035 (+)
G376320 NA other downstream 3015452 19983261 ~ 19983848 (+)
G377022 NA other downstream 3623671 20591480 ~ 20596863 (+)
LOC110522816 LOC106568602 other downstream 3775775 20508074 ~ 20759255 (+)

Expression


Co-expression Network