G372621 (LOC106569151)


Basic Information

Item Value
gene id G372621
gene name LOC106569151
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 16868670 ~ 16869064 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU423607
CCCGTGGTTCCCCGGCTACTGATGTTCATGTAGTTTGCGATGCTGAAGTCTTTTGTGAAATCAACACAAGTGCTGTTAGGTGTGTCGTCAATAATGTTATTGTTTCCCCCATCCTCGCTCCCATCCCCTCGTTCTGTGAAGCGTATCTGAGCCCAGGTGCCCGAGTTGAGCTGCACTCCGTAGAACCGGAGCTGCACTGTGCTCTCCTCCGTTAATTGGATGACCCCATCGTCAGTGGTCGAGGCCGGTTTGTCGCTCCTCTCCAGCCGCATACCGAGCACCTGGCTCCCGCTACTGCGGACACTCGAAGTGGCTGTCTCTGTGCGTCCCCCCACTGCACTCCAAAAGAAAACGATTAGAGTCAGAACGTAGCCTTGCTGCCCGCTCCATTCTGT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU423607 True 395 lncRNA 0.55 1 16868670 16869064

Neighbor

gene id symbol gene type direction distance location
purbb LOC106562912 coding upstream 124603 16741353 ~ 16744067 (+)
ved LOC106569620 coding upstream 133541 16732636 ~ 16735129 (+)
polm LOC106569276 coding upstream 142661 16712182 ~ 16726009 (+)
LOC110523336 NA coding upstream 175240 16690905 ~ 16694551 (+)
pargl LOC106569224 coding upstream 310965 16516800 ~ 16557705 (+)
LOC110523342 LOC106569363 coding downstream 80338 16949402 ~ 16967809 (+)
st8sia5 st8sia5 coding downstream 126330 16995394 ~ 17012011 (+)
LOC110522812 loxhd1 coding downstream 150523 17019587 ~ 17071539 (+)
atp5fa1 LOC106569424 coding downstream 250723 17119787 ~ 17125777 (+)
LOC100136246 LOC106569430 coding downstream 257292 17126356 ~ 17147778 (+)
G372617 NA non-coding upstream 2166 16866270 ~ 16866504 (+)
G372612 NA non-coding upstream 13187 16855129 ~ 16855483 (+)
G372610 NA non-coding upstream 14220 16854229 ~ 16854450 (+)
G372606 NA non-coding upstream 27636 16840489 ~ 16841034 (+)
G372605 NA non-coding upstream 29239 16839226 ~ 16839431 (+)
G372664 NA non-coding downstream 89933 16958997 ~ 16982145 (+)
G372676 NA non-coding downstream 118135 16987199 ~ 16987399 (+)
G372680 NA non-coding downstream 121748 16990812 ~ 16991929 (+)
G372683 NA non-coding downstream 127952 16997016 ~ 16998461 (+)
G372684 NA non-coding downstream 135320 17004384 ~ 17005069 (+)
G372373 NA other upstream 130170 16735642 ~ 16738500 (+)
G372281 LOC106569177 other upstream 647737 16218328 ~ 16220933 (+)
G371615 LOC100194725 other upstream 1073548 15791559 ~ 15795122 (+)
G371182 NA other upstream 1739853 15124290 ~ 15128817 (+)
LOC110519479 LOC106596183 other upstream 1815114 15047739 ~ 15054353 (+)
G372618 LOC105030512 other downstream 1370 16870434 ~ 16882185 (+)
G373726 NA other downstream 835049 17704113 ~ 17707757 (+)
arhgef28a LOC106568988 other downstream 1198379 18067350 ~ 18177035 (+)
G376320 NA other downstream 3114197 19983261 ~ 19983848 (+)
G377022 NA other downstream 3722416 20591480 ~ 20596863 (+)

Expression


Co-expression Network