G372664


Basic Information

Item Value
gene id G372664
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 16958997 ~ 16982145 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU423669
tttttttttttttttttttttttttttttttttttttttttttTATCAACAGCACATTTATTTAAACAAGTAAATCCAAAGTGTGTCTAGGACGAGCTGGAGGCAGCCACTGCAGCACGCTTAGGCTTTGGGGTGGTCCCTTCCCGGAACCCATTCCGAATCTGCGGTAGACGACTCGCAGGTGTCTCAGGCGGCCAGACCCAGTGGTGTTCCTCCTCTTGGCCTTAGCGCTCCAGTTGTCTACAGAAAAGACACAAAAAAGTACACAAATTGTCACAAAGCAGG

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU423669 True 285 lncRNA 0.43 3 16958997 16982145

Neighbor

gene id symbol gene type direction distance location
purbb LOC106562912 coding upstream 214930 16741353 ~ 16744067 (+)
ved LOC106569620 coding upstream 223868 16732636 ~ 16735129 (+)
polm LOC106569276 coding upstream 232988 16712182 ~ 16726009 (+)
LOC110523336 NA coding upstream 265567 16690905 ~ 16694551 (+)
pargl LOC106569224 coding upstream 401292 16516800 ~ 16557705 (+)
st8sia5 st8sia5 coding downstream 13249 16995394 ~ 17012011 (+)
LOC110522812 loxhd1 coding downstream 37442 17019587 ~ 17071539 (+)
atp5fa1 LOC106569424 coding downstream 137642 17119787 ~ 17125777 (+)
LOC100136246 LOC106569430 coding downstream 144211 17126356 ~ 17147778 (+)
LOC110523352 LOC106569472 coding downstream 209271 17191416 ~ 17217186 (+)
G372621 LOC106569151 non-coding upstream 89933 16868670 ~ 16869064 (+)
G372617 NA non-coding upstream 92493 16866270 ~ 16866504 (+)
G372612 NA non-coding upstream 103514 16855129 ~ 16855483 (+)
G372610 NA non-coding upstream 104547 16854229 ~ 16854450 (+)
G372606 NA non-coding upstream 117963 16840489 ~ 16841034 (+)
G372676 NA non-coding downstream 5054 16987199 ~ 16987399 (+)
G372680 NA non-coding downstream 8667 16990812 ~ 16991929 (+)
G372683 NA non-coding downstream 14871 16997016 ~ 16998461 (+)
G372684 NA non-coding downstream 22239 17004384 ~ 17005069 (+)
G372685 NA non-coding downstream 34255 17016400 ~ 17016603 (+)
G372618 LOC105030512 other upstream 76812 16870434 ~ 16882185 (+)
G372373 NA other upstream 220497 16735642 ~ 16738500 (+)
G372281 LOC106569177 other upstream 738064 16218328 ~ 16220933 (+)
G371615 LOC100194725 other upstream 1163875 15791559 ~ 15795122 (+)
G371182 NA other upstream 1830180 15124290 ~ 15128817 (+)
G373726 NA other downstream 721968 17704113 ~ 17707757 (+)
arhgef28a LOC106568988 other downstream 1085298 18067350 ~ 18177035 (+)
G376320 NA other downstream 3001116 19983261 ~ 19983848 (+)
G377022 NA other downstream 3609335 20591480 ~ 20596863 (+)
LOC110522816 LOC106568602 other downstream 3761439 20508074 ~ 20759255 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
rainbow trout (Oncorhynchus mykiss) G381191 NA non-coding NC_048569.1 CM023223.2 24644128 ~ 24644859 (+)