G381191


Basic Information

Item Value
gene id G381191
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 24644128 ~ 24644859 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU433262
cctttgccttgatgacagctttgcacactcttgccattctctcaaccaacttcacctggaatgcttttccaaaagtctagaaggagttcccacatatgttgagcacttgttggctgctattccttcactctgcggtccaactcatcccaaaccatctcaattgggttgaggtcaggtgattgtggtggccaggtcatctgatgcagcactccatcactctcgttCTTGGTCAGATAGccgttacacagcctggaggtgagttgggtcattatcctgttgaaaaacaaatgatagtccaactaagcccaaaccagatgggatggcatatcactgcagaatgctgtggtagccgtgctggttaagtgtgccttgaattctaaattactctgggtctttctttcctgtggcggtcctcatgagagtcagtttcatcatagaggtTGATGGGTTTTGAGACTGCACttacttgaagaaatgttcaatgttcttgaaattttccagattgactgaccttcatatcttgaaataatgatggactgtcatttctctttgcttatttgagctgttcttggcataatatggacttggtcttttatgtcacccctaccttgtcacaacacaactgattggctaaaacagattaaggaaagaaattccacaaattaacttttaacaacattccaggtgactaccccatgaagctggttgag

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU433262 True 710 lncRNA 0.43 2 24644128 24644859

Neighbor

gene id symbol gene type direction distance location
LOC110523483 LOC106567618 coding upstream 116 24635703 ~ 24644012 (+)
LOC110523479 srek1 coding upstream 170523 24432802 ~ 24528819 (+)
zmp:0000000846 LOC106567724 coding upstream 562174 24040145 ~ 24081954 (+)
LOC110523473 LOC106567744 coding upstream 714463 23906231 ~ 23929665 (+)
LOC110523472 gramd3 coding upstream 738127 23896074 ~ 23906001 (+)
trnaa-ugc-9 NA coding downstream 59856 24704715 ~ 24704786 (+)
trnaa-ugc-10 NA coding downstream 74501 24719360 ~ 24719431 (+)
aqp3b LOC106567539 coding downstream 774846 25419705 ~ 25424226 (+)
LOC110523493 LOC106567525 coding downstream 829054 25473913 ~ 25482789 (+)
LOC110523494 NA coding downstream 884050 25528909 ~ 25561013 (+)
G381174 NA non-coding upstream 31689 24573470 ~ 24612439 (+)
G381104 NA non-coding upstream 133257 24507603 ~ 24510871 (+)
G381115 NA non-coding upstream 143916 24465113 ~ 24500212 (+)
G381072 NA non-coding upstream 247635 24396239 ~ 24396493 (+)
G381190 NA non-coding downstream 158 24645017 ~ 24645870 (+)
G381234 NA non-coding downstream 34591 24679450 ~ 24679698 (+)
G381305 NA non-coding downstream 172527 24817386 ~ 24888977 (+)
G381396 NA non-coding downstream 283350 24928209 ~ 24930197 (+)
G381505 NA non-coding downstream 438508 25083367 ~ 25124168 (+)
LOC110523468 vamp5 other upstream 799783 23838502 ~ 23844345 (+)
G380340 NA other upstream 902669 23740434 ~ 23741459 (+)
LOC110522832 LOC106567816 other upstream 1007037 23623921 ~ 23678038 (+)
lhfpl2a lhfpl2 other upstream 1636841 22942205 ~ 23007315 (+)
G378868 NA other upstream 2014459 22602110 ~ 22629669 (+)
G381239 NA other downstream 42880 24687739 ~ 24776429 (+)
G382186 NA other downstream 580583 25225442 ~ 25225730 (+)
LOC110523503 NA other downstream 1530086 26174884 ~ 26186710 (+)
LOC110522865 LOC106567246 other downstream 1792760 26437517 ~ 26502284 (+)
G383794 LOC106566282 other downstream 2016979 26661838 ~ 26663613 (+)

Expression


Co-expression Network