G375708


Basic Information

Item Value
gene id G375708
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 19483237 ~ 19483517 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU427149
catatggaatcatgtagtaacccaaaaagtgttaacaaattcttcaaaatagccaccctttgcacacgcttggcattgtCTCAAGCAGCttgatgaggtagtcacctggaatgcacttcaatgaacaggtgtgccttgttaaaagttcatttgtggaatttctttccttcttaatgcatttgagccaatcagttttgtcgtgacaaggtagggttggtatacagaagatagtcctatttggcaaaagaccaagtccatattgtggaaggacagatcaaata

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU427149 True 281 lncRNA 0.40 1 19483237 19483517

Neighbor

gene id symbol gene type direction distance location
LOC110523377 LOC106568724 coding upstream 119148 19358271 ~ 19364089 (+)
LOC110523370 fa69b coding upstream 905009 18558152 ~ 18578228 (+)
egfl7 LOC106568866 coding upstream 977095 18487620 ~ 18506142 (+)
LOC110523366 nsa2 coding upstream 1060979 18415774 ~ 18422258 (+)
LOC110523365 LOC106568911 coding upstream 1073111 18396328 ~ 18410126 (+)
LOC110523383 LOC106568686 coding downstream 16087 19499604 ~ 19512291 (+)
LOC110523391 LOC106568645 coding downstream 567876 20051393 ~ 20381619 (+)
LOC110523393 LOC106568920 coding downstream 907013 20390530 ~ 20414156 (+)
LOC110522816 LOC106568602 coding downstream 1024557 20508074 ~ 20759255 (+)
LOC110522817 LOC106568462 coding downstream 1347594 20831111 ~ 20842676 (+)
G375696 NA non-coding upstream 6831 19476021 ~ 19476406 (+)
G375629 NA non-coding upstream 60469 19422128 ~ 19422768 (+)
G375610 NA non-coding upstream 88701 19394202 ~ 19394536 (+)
G375494 NA non-coding upstream 94648 19388363 ~ 19388589 (+)
G375491 NA non-coding upstream 99388 19383609 ~ 19383849 (+)
G375723 NA non-coding downstream 7765 19491282 ~ 19491488 (+)
G375730 NA non-coding downstream 13553 19497070 ~ 19497290 (+)
G375871 LOC106568667 non-coding downstream 137553 19621070 ~ 19622673 (+)
G375980 NA non-coding downstream 322212 19805729 ~ 19812504 (+)
arhgef28a LOC106568988 other upstream 1399872 18067350 ~ 18177035 (+)
G373726 NA other upstream 1775480 17704113 ~ 17707757 (+)
G372618 LOC105030512 other upstream 2601052 16870434 ~ 16882185 (+)
G372373 NA other upstream 2744737 16735642 ~ 16738500 (+)
G372281 LOC106569177 other upstream 3262304 16218328 ~ 16220933 (+)
G376320 NA other downstream 499744 19983261 ~ 19983848 (+)
G377022 NA other downstream 1107963 20591480 ~ 20596863 (+)
LOC110523400 LOC106568542 other downstream 1624652 21108129 ~ 21160149 (+)

Expression


Co-expression Network