XLOC_023218 (BX005461.4)


Basic Information

Item Value
gene id XLOC_023218
gene name BX005461.4
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007135.7
NCBI id CM002908.2
chromosome length 42172926
location 994016 ~ 994130 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00045948
gCCGGCAGctcgctctctgcaactctcacatggtcgccaactgaagctaagcagggctgggcCCGGTCAGTgactggatgggagaccacatgggaaagctgggttgctgttggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000116324

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00045948 True 115 rRNA 0.60 1 994016 994130

Neighbor

gene id symbol gene type direction distance location
XLOC_023215 napga coding downstream 11573 947473 ~ 982443 (-)
XLOC_023216 BX005461.3 coding downstream 30974 961874 ~ 963042 (-)
XLOC_023214 CU896674.1 coding downstream 466633 527269 ~ 527383 (-)
XLOC_023213 NA coding downstream 715044 255681 ~ 278972 (-)
XLOC_023212 vopp1 coding downstream 788741 195072 ~ 205275 (-)
XLOC_023219 ralaa coding upstream 17028 1011158 ~ 1023184 (-)
XLOC_023220 NA coding upstream 39299 1033429 ~ 1109445 (-)
XLOC_023221 itgb1a coding upstream 116008 1110138 ~ 1151483 (-)
XLOC_023222 nrp1a coding upstream 168195 1162325 ~ 1356668 (-)
XLOC_023223 NA coding upstream 468089 1462219 ~ 1619963 (-)
XLOC_023665 dre-mir-735 misc upstream 37183831 38177961 ~ 38178027 (-)
XLOC_023211 NA non-coding downstream 833625 150350 ~ 160391 (-)
XLOC_023225 CABZ01067348.1 non-coding upstream 679120 1673250 ~ 1837822 (-)
XLOC_023231 CU104764.1 non-coding upstream 1694948 2689078 ~ 2689194 (-)
XLOC_023232 NA non-coding upstream 1768590 2762720 ~ 2821784 (-)

Expression


Co-expression Network