XLOC_023232


Basic Information

Item Value
gene id XLOC_023232
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007135.7
NCBI id CM002908.2
chromosome length 42172926
location 2762720 ~ 2821784 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00046840
gtttttctaggctttattggtgataatggtttATTCTTTctgtaataaacaatatatttgtaGAACAACCCAcagaaaatgcatttaaaggcatgAAACTGACAGAACTTTATTGTAACACTAATAACACATGACAAGAAACAAAACACTATGTACAGTTTCTACTGTGTATGCTGTGTGTGGACAGTAGAGTGCGTGATCAAAGAGTTTGTGGCACAATGTAAACAGGACGATTGGATGGTCGGTCTGTTGTGCTGCAGGTCTGAATGCAgttctccatcatcatcatcttcatcatcatcatcctcatcatgtTTGTTTAAAGAGTCTGAACAGTTGAGCTTCAGTTCAGGAGCTCTTCTGCTTCTCCTGCTCCACTACCGTCTTCTGGGCCTCATACATCTGACCTACACACACCTGTCTTTGTATGATGGCTAAGTTTTCGCGGGCTCTGTTCAGCAGCTCCTCCACACGCTGCGGATCCTCCACTGTCCGGTTCTCCCTGAAGGCATCTCGTACTCGCCGAAGAGCGTACGTCCT

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00046840 True 540 lncRNA 0.44 2 2762720 2821784

Neighbor

gene id symbol gene type direction distance location
XLOC_023230 fars2 coding downstream 25911 2557794 ~ 2736809 (-)
XLOC_023231 CU104764.1 coding downstream 73526 2689078 ~ 2689194 (-)
XLOC_023229 ly86 coding downstream 295053 2460178 ~ 2467667 (-)
XLOC_023228 rreb1a coding downstream 312123 2346514 ~ 2450597 (-)
XLOC_023227 cul2 coding downstream 419354 2283959 ~ 2343366 (-)
XLOC_023233 NA coding upstream 4426 2826210 ~ 2829208 (-)
XLOC_023234 cyb5a coding upstream 14523 2836307 ~ 2843107 (-)
XLOC_023235 dipk1c coding upstream 67551 2889335 ~ 2917540 (-)
XLOC_023236 BX897669.1 coding upstream 97621 2919405 ~ 2919521 (-)
XLOC_023237 tubb6 coding upstream 119216 2941000 ~ 2947406 (-)
XLOC_023665 dre-mir-735 misc upstream 35356177 38177961 ~ 38178027 (-)
XLOC_023225 CABZ01067348.1 non-coding downstream 924898 1673250 ~ 1837822 (-)
XLOC_023223 NA non-coding downstream 1142757 1462219 ~ 1619963 (-)
XLOC_023220 NA non-coding downstream 1653275 1033429 ~ 1109445 (-)
XLOC_023218 BX005461.4 non-coding downstream 1768590 994016 ~ 994130 (-)
XLOC_023243 NA non-coding upstream 659609 3481393 ~ 3487660 (-)
XLOC_023244 AL954666.1 non-coding upstream 687593 3509377 ~ 3534690 (-)
XLOC_023246 NA non-coding upstream 980002 3801786 ~ 3814597 (-)

Expression


Co-expression Network