XLOC_023246



Basic Information


Item Value
gene id XLOC_023246
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007135.7
NCBI id CM002908.2
chromosome length 42172926
location 3801786 ~ 3814597 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00046841
TTGTGTTTAATTGTTCCCCCGGTGTTCACTCTACAGGATGCATTCACTTGCCGTCTCAAAGGGGTCTGAGCAAAACGAGACTGTAGGCGTTTCCTGGCTCGATGGCATGATGTATCGCAGTGTGTCCCAACAAGGGTCTCTCGTGAATGTTTAAGCGGTGGGGTTCTGACCATCAAACCTTCTCTGCAACCTATTTGTGATTGATTAACCGCCATTCAGCGTTCACACCAGAGGAGAGAAAAGTGAATGAGAGAGAAGGAGTTTGCATCCAGTGCGGTCTTGTAATCAGCGACAGGTAAAAGAAGCTATATTTAGCAGCAATCACACGTCACATCAATCATCGATGATGCTTT

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00046841 True 353 lncRNA 0.46 2 3801786 3814597

Neighbor


gene id symbol gene type direction distance location
XLOC_023245 adarb2 coding downstream 18289 3537762 ~ 3783497 (-)
XLOC_023244 AL954666.1 coding downstream 267096 3509377 ~ 3534690 (-)
XLOC_023243 NA coding downstream 314126 3481393 ~ 3487660 (-)
XLOC_023242 idi1 coding downstream 324683 3469373 ~ 3477103 (-)
XLOC_023240 nck1b coding downstream 333576 3347510 ~ 3468210 (-)
XLOC_023247 CR388417.2 coding upstream 2101 3816698 ~ 3842866 (-)
XLOC_023248 NA coding upstream 30495 3845092 ~ 4134381 (-)
XLOC_023249 klf6a coding upstream 326887 4141484 ~ 4148915 (-)
XLOC_023250 BX004842.1 coding upstream 503582 4318179 ~ 4318293 (-)
XLOC_023251 fzd8a coding upstream 633038 4447635 ~ 4450238 (-)
XLOC_023665 dre-mir-735 misc upstream 34363364 38177961 ~ 38178027 (-)
XLOC_023236 BX897669.1 non-coding downstream 882265 2919405 ~ 2919521 (-)
XLOC_023233 NA non-coding downstream 972578 2826210 ~ 2829208 (-)
XLOC_023232 NA non-coding downstream 980002 2762720 ~ 2821784 (-)
XLOC_023252 NA non-coding upstream 697632 4512229 ~ 4513778 (-)
XLOC_023255 NA non-coding upstream 1060733 4875330 ~ 5020125 (-)

Expression



Co-expression Network