XLOC_023235 (dipk1c)


Basic Information

Item Value
gene id XLOC_023235
gene name dipk1c
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007135.7
NCBI id CM002908.2
chromosome length 42172926
location 2889335 ~ 2917540 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00045984
atgacttcaactgtgtgtggaAATCCAGATCGTAAACTGATTGTGTGTCTGTATTTTCAGTGCGACGAGTATCATCAAGGAGTTCTGACTGGCGATCTCTGCGATGACCTCTGCGTGTCGGGTCAAGTGGAGTACAAACGCTGCCTCTATTATGAGAACGGCAAGAAAGTGATGGCAGCCAGCTGGCGTGGCCTACCAGTGGTCCTGAAGTCAAAGCTTGAGAACTTCTCCTCCTACGAAGCTCTTTCTCTGCTGGACTACCCAGACGGAGGAGCTGGTGGTGGTGAGGATGAACTCTCGCCTCTGGATGTGGTTTTTTATGCCACTCTGGAGATCAAAAACTCTCTGGGTCTGGAGACGGGAAATAATTTGACTTTACCACGTTTGTGGGGTCAGCGGCTGAAGGAGAGCGAGCGGATGTACTCGCGGGCGGAGCTGGCCTCGCTATGGGCTCTGCTTCAGCAGGAGGAGTACACCTTCCTCAGGGTCCTGCAGGATTTAACAAACCATGTTGCCAAGATTTTGGGCTCCTGCGGACACTTCTATGCTGTGGAGTATTTGGCGGCGGGACATGCGTGGGATCAGCATATCTTCTCTTTGGACGAGCTAACATTGAGTCCTTCGCCGAGCACGTTCTCTGTGAAAGAAATGGTGCCTCGAGTGGCTTTGAGCTTTTTGGAGATGGTGGAGCATTTTGAGAATGATTTTTCACACCGTTTGCATCTCTGTGATATTAAACCAGAGAACTTTGCCATCCGGAAGGATCTGACGGTGGTGGCGATAGATGTGGACATGGCTTTTTTCGAGCCCAAAATGAGAGAGATACTTGAGCAGAACTGCACCAACGACAGCGACTGCAACTTCTTCGACTGCATTTCGAAGTGCGACAAAACGAAAAACAGATGTGGGTCGAAACGCAGAAACAGTAACCTTCAGGTGATCTGTGAGAAGATCTTCAGGCCGTGGTTTTCTCCCACACTGCTGGGCGCTAAAGCAGGGCTCCCCCTACAGGTAGAGTTGCAGCGCGCGGTGCAGGAGTGTGCAGAAATGGAGGACAGCGAGCATCGGCAGGACATCAGACAGCAGCTGTACGCTCTCCTCCGAGAGCTCGTCCAGGAGGACACAGGACACCCGAGGGGAGGACAAGAACATAAGAGAAGACGCGTCCATACTGCACTTAATTTCTGAACTCTTAAAAGAGCTAATTCAGTCATGTGCAATTCTGGAGAACATCTCCGATGACTAATaaagttaaaatgttttacaacaaATAGCATAGTGGTTTACGGCTAGTATTCAAAATGTCTGTTCTGAATAGATCaggcaaaaatgtatattttgtcttTCCAAACTTGTTTTTCTTCAGTCACgaaaaataaaacatactttGAACTGTCAGCAGGAGCGCTAgttatatatattagtatttattagtATGTATTTGagggtggctcagtgattagcactgtggcCATCAAGAAcatcaagaaagtcactggttcgaatcctgtctggaccagttggcattgctgtgaggagtttgcatattctccctgtgttggcgtgggtttcctccggttgctccgatttctcccacagtctaaagatatgcgctacaggtgaattggagaaACTAAATTGCAAGTAGTATatgactgtatgggtgtttcacaattctgggttgctgttggaagggcatccgctgcataaaacatatgctggaatagttgggggttcattccgctgtggcaacgtctaaaatagagactaagtcgaaggaaaatcaatgaataagcATGTAAATGACTAGTTGTAGAGTTATAGGAACTAACCCTTTACAAAGACTTTGATTGTCATGCAATCTGGCTAATCATACTACTGATATAAGCATGCCTGTTgccatacagttgaggtcaaaattatttgactTCCCAtaaaatttttattcaattttaaataattcccaagtGATGACAGACAGACTAtgagttttcacagtatttgctataagaTTTTTAGctgcaataaaagcagttttaaaatattgtcatcatggcaaagtcaGAAACAATAAGTAATTAGAAATTAGTCACtgaaaatattgtgtttaaaaatgtgttggaaaaagcACCCCTTAAATCTCACAGAAGAGCTCaccattttgacttcagctgtatattcatatattcattttagATTTGAAAATATGTGAAAGGTGCTGTTATGGGACATAGACAGCAGGCACCCAGACAGGCTATACAAAATTCATGTCTACTCTTGTCATAAAAATCTGTATTTCAGAAGTTCACAGAGACCGACACCACAAACAGAACACcctgtttgttttcttatttatcaAAAGCACAACCCTTTTTTTATATTGTGACTATACCCAAGCAGAACTAGACCCTATATAAGTGCAAATAATGACTAAGCCTCTGTAAGATCAAAACAGATGGAGTACTTTAGGTCATCTGCAATGTGCCGGCACACTTATCAAAAACCTCTAAACCTGTCATCTAGATGCCTGAGTTTAATTCATAAACATCTAAATGTGTCAATCATCTCGTTCACAACACTCCTACCCTGTGTCCTCTAGgctataacttatttatttacagtctttattttgtttacttCATTTTGACATCCGGAATATATCATTCAAATGCATATTTCAGAGATTTCTGTCTGCTTCTTTCTGAAATAAACATATCCGTTTTCTAGAAATTATTTCTATTCATTATTTCTTAAGGGAATACAGGTCTGATAATAATATAGCAAAGGGAAAAGAGTCTAGTAAAGAGTGCTGAAGAGTCATTTTACAAACTAGCCAGCAAGTTGGTTCCTAGAGAACTAATATTTTCCACAATGGCCATCTTCTGGTTGCATTCTTGCCGTCACAAGGAACTCTAAATTGTTGTAAGCCTGCTGACAGTGACAACAAGTGCAGCATTCAACATAATCAACAACTGGAGGATGGAGGACTGTGATTTCATTGTGTCATTGGTTCTGTAATAATGTATTGGAATACAGACATACATGTATAAGTAATGCAACTGAAGCAGTCACACTTTCAAATGATGAGCTGTtgtattgtacactgtaaaaatgctgagtttcacacaattaaaataacttattttgataatcaattaaattaacttaacaaatttaagtgaattgaaaataaaacaattaaattgtcccaaaaatcagtttcagctcattttaaataagtagtttgaacaagcagaatgTAAACTTACTAGAGAATATGTTTAAGTCTGCACTAATTTAGTCCCCCTAAAAAGAATTTCTAATCCCTGAGAATGAAACAAAAGGTATGAAAACTCCTAAtgcaaaataaattatgtttttattgagTTTCACTGCATAGACAAACATTACGTTATTTGTTTTATAGAAGAAATATGTTCTGGTTATAAGTTCAAGTTTGGTGTGGCAAGCTATTTTTCTGATAGGCCTTTTGCTGTTGAGAAAAAGGTGCGGTTACTTTAATCAGTTTCAGTAAGCATTTTAGGTAAATACCAGTTAATTCAGTTCATGCAATTTAAAATTCCTTTCGCAGATTTGGTCATGTGAATTTGTTATACTTCCCAATAGAAAGTGGTTTAAAAGTGATATGTGTATCCTCTGCTATTAATATTGTTGGTAAACCTATATGTgcttatttaaaaatgtcaataaaatagataaaaatgccttcaaaaaaatcaaaactgctcaACAAATTCAGGGCAAGGAGGCAAAAAGCCTGTATATAAACTTAATCATCTGTTGTGACTAAagtgaaatgaaaacaaatgataaaataaaaggtaaaaattgCCATTCAGTTAAGAGATTTGCAACGCTGAGCATTATAAACCtaccacatttgtttttgttgatatattttattgttataaatgcAATGGCAAAACAGAGGGATTTAGCAACAAAGTGCTTTTAGTTTAAACTAAATTGGTTCATGTAACAGCTCTAAGCaatttaatacatataaatatgaacaaaacGTCAACCAGTTGGTTATGAAGCCTAAAGGGTTGACAAACAAGGTAGAAAATGCCACCGGAAATCAATACTGGAATACTGTAGGTCATTTCTGACCCTAGACAGTACACAGTTGACTGTTTTTTTCCCATCAATGTGACAATACTTTACACAAAATACTCTGGATCATCTCAGCTAATGCAACCCTTTGCTGTAGAGAAATTGTCTTTAAGTGTGATTCTTTGTATAAGCATTTCAATAAACCATGGCTCAGGCACAATCTATCAGTTTTGCGTCTTACCGCACTAAATCCCAGCTGCACGCCATCACGCCAAACTATATTCAGTTCACATATCAACACTTTGCAGAGAATCCAACATAAAGCTCAAAGATCAAACCAGCATTTGGTTCCTACTGATGGAAAAGGAACACTCGGTAGATTTGTTTGGATCTACCTTCAGCCTTGTGGCCTTCACAGGAGATCAGGTTTCAATCTGCCTCCAGCTGTCTTTCAGAGGAGAGAGACTAAACACAAGGCTTGAGCACGGGGAGGATGAGCTGGTGCAGAGAGACTATAGAAGCACAGATCACCTGCTGGTGAACTTCACTGATTTATGTTGTTCGGTCTTGAACTACAAACGTTTGGCAGCTTGGCTTGCAGAAGCAGCAGCCATCAAATTTTGCATCTCCAAGGCAACGACAGGGGTCTGGTTTTGATCTGCTCAGAAGGAACCTGCTGACAGCATTAGATATGTTTGCATCTGcctatttttatgcacactttgaaatatttcattaaaaaaaattgctttatggAAATActaagatgtgcataaatttgtACCTCTTAACAAAGATTGTACATGTACAAAACTGAGAACATTTTTATCTgataagaaaaaaatgtgcaaaaactacaggcccgtagccagcctggtgaaaggggtggttctttttactcaaaaagtggaccttttcgCAGATATTCACCTCATTTTCAGTTTAACTACTAAGTATTTATAggttaaatactgcattttagtgacattttaagcactatgcATTTCTGCATTAACTTGTCGGGTggccatcataaccacactttttgacgtaccaaaaacatttcctaaagattcaGAATATAGGAATTATAcgtataatttttttatcatatataaTTAGGAAAAGATAAAGGAATCggctaaagttttaaattaaaaatagccTATTAGGTTaagtagcctattgtcatttcaTAAGCAAATAACAAACTAGCCAGCATATTCAACTTTCTCAGTCAGAATTCGGCcacttgaataaaaaaaagattatacatgatgataataatattgtagagcttcccaATTGTTCTAGCTCTCCTGTAAAatcagtacatttgaaaattcaatgaataacaataataggCTAATAAGtattacaattaaattttatgcgcattaaaatttatttttggtgtttcacacctctttatttgtatttttttttaaagaataaggtccaagaatTTGAACAGATTTTACTTGTAagatgttttctctatttaacaacaatacagtaggtCAGTAGTGAGAGATGACTTCACTTTCATCAGATTCTTCTGGGTTTTAAAGCATacttcaatgatttttttttttacaatttatgatgggaaagcagtcaaaataggacaaattctggacctttgtttGTGGGGGGTGGATCTTTCAAACCACCCAAACCCACCTGGCTGCGGGCCTGAACTACAActgaaacacatttactgaacaaattccagcatgcacaTCCAAAAGAAATTTTATACTGAATAAACACA
>TCONS_00045985
GCAGAGAGAAAGTCTGCTCATTCACAACACAAACGCAGGAAGCTGGAGaggaagcagagagagagagagaaggatcTGCAGGTTTAACATTCAGAGGAGGAGCGGCAGCACTGAAGCAGATCCTCCACGGCTCCACAGATGCCACACACTCCCTCATCCCTGAGAGGAAACCAGCGGGCTCCTGGGGAAGGGGGTCCAACAGATGTGGCGGCCCCTGCGCGGGGCCCTGGGCTCGGCCCGCAGGTGTCTGGGGGTAAAGGTGTGCCGGAGGAGCGCGCTGCTGGTGGTCCTGCTCTGGCTGGTCTCCTGGATCTTCCTCAATGGCCTGGTGTTCGTCCACAGGAACATGTTCTCTGACTTCTGCACTGATGACAAGAGCAAAGAGATCCTGCAGAGGGTGTGCGACGAGTATCATCAAGGAGTTCTGACTGGCGATCTCTGCGATGACCTCTGCGTGTCGGGTCAAGTGGAGTACAAACGCTGCCTCTATTATGAGAACGGCAAGAAAGTGATGGCAGCCAGCTGGCGTGGCCTACCAGTGGTCCTGAAGTCAAAGCTTGAGAACTTCTCCTCCTACGAAGCTCTTTCTCTGCTGGACTACCCAGACGGAGGAGCTGGTGGTGGTGAGGATGAACTCTCGCCTCTGGATGTGGTTTTTTATGCCACTCTGGAGATCAAAAACTCTCTGGGTCTGGAGACGGGAAATAATTTGACTTTACCACGTTTGTGGGGTCAGCGGCTGAAGGAGAGCGAGCGGATGTACTCGCGGGCGGAGCTGGCCTCGCTATGGGCTCTGCTTCAGCAGGAGGAGTACACCTTCCTCAGGGTCCTGCAGGATTTAACAAACCATGTTGCCAAGATTTTGGGCTCCTGCGGACACTTCTATGCTGTGGAGTATTTGGCGGCGGGACATGCGTGGGATCAGCATATCTTCTCTTTGGACGAGCTAACATTGAGTCCTTCGCCGAGCACGTTCTCTGTGAAAGAAATGGTGCCTCGAGTGGCTTTGAGCTTTTTGGAGATGGTGGAGCATTTTGAGAATGATTTTTCACACCGTTTGCATCTCTGTGATATTAAACCAGAGAACTTTGCCATCCGGAAGGATCTGACGGTGGTGGCGATAGATGTGGACATGGCTTTTTTCGAGCCCAAAATGAGAGAGATACTTGAGCAGAACTGCACCAACGACAGCGACTGCAACTTCTTCGACTGCATTTCGAAGTGCGACAAAACGAAAAACAGATGTGGGTCGAAACGCAGAAACAGTAACCTTCAGGTGATCTGTGAGAAGATCTTCAGGCCGTGGTTTTCTCCCACACTGCTGGGCGCTAAAGCAGGGCTCCCCCTACAGGTAGAGTTGCAGCGCGCGGTGCAGGAGTGTGCAGAAATGGAGGACAGCGAGCATCGGCAGGACATCAGACAGCAGCTGTACGCTCTCCTCCGAGAGCTCGTCCAGGAGGACACAGGACACCCGAGGGGAGGACAAGAACATAAGAGAAGACGCGTCCATACTGCACTTAATTTCTGAACTCTTAAAAGAGCTAATTCAGTCATGTGCAATTCTGGAGAACATCTCCGATGACTAATaaagttaaaatgttttacaacaaATAGCATAGTGGTTTACGGCTAGTATTCAAAATGTCTGTTCTGAATAGATCaggcaaaaatgtatattttgtcttTCCAAACTTGTTTTTCTTCAGTCACgaaaaataaaacatactttGAACTGTCAGCAGGAGCGCTAgttatatatattagtatttattagtATGTATTTGagggtggctcagtgattagcactgtggcCATCAAGAAcatcaagaaagtcactggttcgaatcctgtctggaccagttggcattgctgtgaggagtttgcatattctccctgtgttggcgtgggtttcctccggttgctccgatttctcccacagtctaaagatatgcgctacaggtgaattggagaaACTAAATTGCAAGTAGTATatgactgtatgggtgtttcacaattctgggttgctgttggaagggcatccgctgcataaaacatatgctggaatagttgggggttcattccgctgtggcaacgtctaaaatagagactaagtcgaaggaaaatcaatgaataagcATGTAAATGACTAGTTGTAGAGTTATAGGAACTAACCCTTTACAAAGACTTTGATTGTCATGCAATCTGGCTAATCATACTACTGATATAAGCATGCCTGTTgccatacagttgaggtcaaaattatttgactTCCCAtaaaatttttattcaattttaaataattcccaagtGATGACAGACAGACTAtgagttttcacagtatttgctataagaTTTTTAGctgcaataaaagcagttttaaaatattgtcatcatggcaaagtcaGAAACAATAAGTAATTAGAAATTAGTCACtgaaaatattgtgtttaaaaatgtgttggaaaaagcACCCCTTAAATCTCACAGAAGAGCTCaccattttgacttcagctgtatattcatatattcattttagATTTGAAAATATGTGAAAGGTGCTGTTATGGGACATAGACAGCAGGCACCCAGACAGGCTATACAAAATTCATGTCTACTCTTGTCATAAAAATCTGTATTTCAGAAGTTCACAGAGACCGACACCACAAACAGAACACcctgtttgttttcttatttatcaAAAGCACAACCCTTTTTTTATATTGTGACTATACCCAAGCAGAACTAGACCCTATATAAGTGCAAATAATGACTAAGCCTCTGTAAGATCAAAACAGATGGAGTACTTTAGGTCATCTGCAATGTGCCGGCACACTTATCAAAAACCTCTAAACCTGTCATCTAGATGCCTGAGTTTAATTCATAAACATCTAAATGTGTCAATCATCTCGTTCACAACACTCCTACCCTGTGTCCTCTAGgctataacttatttatttacagtctttattttgtttacttCATTTTGACATCCGGAATATATCATTCAAATGCATATTTCAGAGATTTCTGTCTGCTTCTTTCTGAAATAAACATATCCGTTTTCTAGAAA

Function

symbol description
dipk1c Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human DIPK1C (divergent protein kinase domain 1C).

GO:

id name namespace
GO:0008150 biological_process biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-030131-8001 Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human DIPK1C (divergent protein kinase domain 1C).

Ensembl:

ensembl_id ENSDARG00000105040

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00045984 False 5851 mRNA 0.38 3 2889335 2900511
TCONS_00045985 True 3070 mRNA 0.45 4 2892456 2917540

Neighbor

gene id symbol gene type direction distance location
XLOC_023234 cyb5a coding downstream 46228 2836307 ~ 2843107 (-)
XLOC_023233 NA coding downstream 60127 2826210 ~ 2829208 (-)
XLOC_023232 NA coding downstream 67551 2762720 ~ 2821784 (-)
XLOC_023230 fars2 coding downstream 152526 2557794 ~ 2736809 (-)
XLOC_023231 CU104764.1 coding downstream 200141 2689078 ~ 2689194 (-)
XLOC_023236 BX897669.1 coding upstream 1865 2919405 ~ 2919521 (-)
XLOC_023237 tubb6 coding upstream 23460 2941000 ~ 2947406 (-)
XLOC_023238 cidea coding upstream 32397 2949937 ~ 2959182 (-)
XLOC_023239 sugct coding upstream 339836 3257376 ~ 3342665 (-)
XLOC_023240 nck1b coding upstream 429970 3347510 ~ 3468210 (-)
XLOC_023665 dre-mir-735 misc upstream 35260421 38177961 ~ 38178027 (-)
XLOC_023225 CABZ01067348.1 non-coding downstream 1051513 1673250 ~ 1837822 (-)
XLOC_023223 NA non-coding downstream 1269372 1462219 ~ 1619963 (-)
XLOC_023243 NA non-coding upstream 563853 3481393 ~ 3487660 (-)
XLOC_023244 AL954666.1 non-coding upstream 591837 3509377 ~ 3534690 (-)
XLOC_023246 NA non-coding upstream 884246 3801786 ~ 3814597 (-)
XLOC_023247 CR388417.2 non-coding upstream 899158 3816698 ~ 3842866 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000070_03298978_03315510 FAM69C coding CI01000070 null 3297934 ~ 3316349 (+)