G379263


Basic Information

Item Value
gene id G379263
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 23330368 ~ 23330594 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU431114
accataaccttaaccccaaaccctaacccttaaccttaaccccaaacctaaccctaactcctaacccttaaccttaaccccaaacctaaccctaactcctgactcctaacccttaacccttaaccataaccccaaacctaaccctaactcctgactcctaacccttaaccataaccttaaccccaaaccctaacccttaaccttaacccaaaaccctaacccttaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU431114 True 227 lncRNA 0.45 1 23330368 23330594

Neighbor

gene id symbol gene type direction distance location
wdr41 wdr41 coding upstream 78780 23237803 ~ 23251588 (+)
LOC110523452 otp coding upstream 115553 23208733 ~ 23214815 (+)
tbca tbca coding upstream 126802 23193874 ~ 23203566 (+)
LOC110523451 ap3b1 coding upstream 172348 23065654 ~ 23158020 (+)
lhfpl2a lhfpl2 coding upstream 323053 22942205 ~ 23007315 (+)
LOC110523456 crhbp coding downstream 40372 23370966 ~ 23391981 (+)
LOC110522829 LOC106567920 coding downstream 91049 23421643 ~ 23422884 (+)
LOC110522830 f2rl2 coding downstream 140394 23470988 ~ 23474212 (+)
LOC110522832 LOC106567816 coding downstream 293327 23623921 ~ 23678038 (+)
vatg1 LOC106567829 coding downstream 379249 23709843 ~ 23711877 (+)
G379202 NA non-coding upstream 126269 23203871 ~ 23204099 (+)
G379162 NA non-coding upstream 214339 23115685 ~ 23116029 (+)
G379142 NA non-coding upstream 271621 23058519 ~ 23058747 (+)
G379139 NA non-coding upstream 275723 23054403 ~ 23054645 (+)
G379131 NA non-coding upstream 281677 23048456 ~ 23048691 (+)
G379273 NA non-coding downstream 20511 23351105 ~ 23351363 (+)
G379279 aggf1 non-coding downstream 25412 23356006 ~ 23356429 (+)
G379282 NA non-coding downstream 29630 23360224 ~ 23360688 (+)
G379333 NA non-coding downstream 125771 23456365 ~ 23512877 (+)
G379350 NA non-coding downstream 145886 23476480 ~ 23515214 (+)
G378868 NA other upstream 700699 22602110 ~ 22629669 (+)
G378832 NA other upstream 824098 22503752 ~ 22506270 (+)
G378660 NA other upstream 1098448 22172535 ~ 22231920 (+)
LOC110523400 LOC106568542 other upstream 2171449 21108129 ~ 21160149 (+)
G380340 NA other downstream 409840 23740434 ~ 23741459 (+)
LOC110523468 vamp5 other downstream 507930 23838502 ~ 23844345 (+)
G381239 NA other downstream 1357145 24687739 ~ 24776429 (+)
G382186 NA other downstream 1894848 25225442 ~ 25225730 (+)

Expression


Co-expression Network