G380431


Basic Information

Item Value
gene id G380431
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 23948593 ~ 23948796 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU432451
atatcaagaagcttgtgctggggacaataaaaggccactctaaaatgtgcagttttgtcacacaacataatgccacagatgtctcaatttCTGAGGGAGCATGcagccagagctgttgccagagaatttcatgttaatttctctatcataagccgccAATGATGTTTTAGAGGATTTGTCAGTAcgcccaaccggcctcacaac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU432451 True 204 lncRNA 0.44 1 23948593 23948796

Neighbor

gene id symbol gene type direction distance location
LOC110523473 LOC106567744 coding upstream 18928 23906231 ~ 23929665 (+)
LOC110523472 gramd3 coding upstream 42592 23896074 ~ 23906001 (+)
oclna ocln coding upstream 65252 23873604 ~ 23883341 (+)
marveld2a mald2 coding upstream 75816 23861151 ~ 23872777 (+)
stard4 stard4 coding upstream 95040 23848218 ~ 23853553 (+)
zmp:0000000846 LOC106567724 coding downstream 91349 24040145 ~ 24081954 (+)
LOC110523479 srek1 coding downstream 505276 24432802 ~ 24528819 (+)
LOC110523483 LOC106567618 coding downstream 686907 24635703 ~ 24644012 (+)
trnaa-ugc-9 NA coding downstream 755919 24704715 ~ 24704786 (+)
trnaa-ugc-10 NA coding downstream 770564 24719360 ~ 24719431 (+)
G380372 NA non-coding upstream 140657 23807214 ~ 23807936 (+)
G380336 NA non-coding upstream 182749 23763779 ~ 23765844 (+)
G380365 NA non-coding upstream 185070 23763303 ~ 23763523 (+)
G380363 NA non-coding upstream 186185 23762021 ~ 23762408 (+)
G380357 NA non-coding upstream 195116 23753221 ~ 23753477 (+)
G380433 NA non-coding downstream 4263 23953059 ~ 23953354 (+)
G380434 NA non-coding downstream 5426 23954222 ~ 23982341 (+)
G380457 NA non-coding downstream 33655 23982451 ~ 23982673 (+)
G380461 NA non-coding downstream 43283 23992079 ~ 23992280 (+)
G380477 NA non-coding downstream 74797 24023593 ~ 24024258 (+)
LOC110523468 vamp5 other upstream 104248 23838502 ~ 23844345 (+)
G380340 NA other upstream 207134 23740434 ~ 23741459 (+)
LOC110522832 LOC106567816 other upstream 311502 23623921 ~ 23678038 (+)
lhfpl2a lhfpl2 other upstream 941306 22942205 ~ 23007315 (+)
G378868 NA other upstream 1318924 22602110 ~ 22629669 (+)
G381239 NA other downstream 738943 24687739 ~ 24776429 (+)
G382186 NA other downstream 1276646 25225442 ~ 25225730 (+)
LOC110523503 NA other downstream 2226149 26174884 ~ 26186710 (+)
LOC110522865 LOC106567246 other downstream 2488823 26437517 ~ 26502284 (+)
G383794 LOC106566282 other downstream 2713042 26661838 ~ 26663613 (+)

Expression


Co-expression Network