G385543


Basic Information

Item Value
gene id G385543
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 28089671 ~ 28093373 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU437911
TAGACAAAAAGGTGGTTTCTTTATTTGTTGTGTCAGAGTATGGTGCCTTAACACAGGGCTTCACCAATCCTACAGTGGGACTGTGACACTCCACAAgagtctgtgtttgtgtgagtgtacaAGACTTGCACAGATCTATGGAACAATCACACCATATTTGGGTTTTATGATGTTCCCTCTCAGATACAGGTGGCTACACAGGGCATATGTCCACAACCAAAGAGAGCATTTATCCCAGGATGGAATGGACTGCAGGTGAATGGGAAGATGGAGGGAGTGGATGATAGTAAGGGATGGGGGGGAcagtcactttctctccctcttgacGTGTCCAGGCTAGCTTACTTCTTAGCCTTGCCCTGGGCAGCCACAGCCTCCATGGCCTTCTTCACGGTCTCGGCATCTCCCAGGAAGGCCATGGGCTTGACCGGCTTCAGATTCACGTCCAGCTCATACACGATGGGTATACCTGTTGGCAGGTTCAACTCCATGATGGCAGCGTCGGACATGTTTAAGTTCCTTTAACCAAACACAGGAACCACAGCCCTCCCTTATAGTACACACACTCTGAGACCAACAGCCCCAAG

Function

NR:

description
phosphoglycerate mutase 2-like isoform X1

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU437911 True 587 lncRNA 0.50 3 28089671 28093373

Neighbor

gene id symbol gene type direction distance location
LOC110523531 LOC106566436 coding upstream 21698 28052621 ~ 28067973 (+)
si:ch211-222n4.2 LOC106566406 coding upstream 73619 28008073 ~ 28016052 (+)
LOC110523528 nsma3 coding upstream 95248 27982645 ~ 27994423 (+)
LOC118964522 NA coding upstream 348582 27735878 ~ 27741089 (+)
LOC110522888 LOC106566402 coding upstream 370506 27675352 ~ 27719165 (+)
LOC110523534 LOC106566461 coding downstream 16449 28109822 ~ 28112779 (+)
ftsj1 LOC106566467 coding downstream 134640 28228013 ~ 28235500 (+)
LOC110523538 NA coding downstream 145742 28239115 ~ 28241670 (+)
LOC110518653 LOC106566474 coding downstream 164594 28257967 ~ 28261576 (+)
LOC118964581 NA coding downstream 168404 28261777 ~ 28264335 (+)
G385531 NA non-coding upstream 103515 27985456 ~ 27986156 (+)
G385512 NA non-coding upstream 115888 27973567 ~ 27973783 (+)
G385510 NA non-coding upstream 116368 27972989 ~ 27973303 (+)
G385499 NA non-coding upstream 128456 27961016 ~ 27961215 (+)
G385498 NA non-coding upstream 129089 27960204 ~ 27960582 (+)
G385590 NA non-coding downstream 9855 28103228 ~ 28103605 (+)
G385592 NA non-coding downstream 15792 28109165 ~ 28109383 (+)
G385555 NA non-coding downstream 19461 28112834 ~ 28113437 (+)
G385665 NA non-coding downstream 32421 28125794 ~ 28126313 (+)
G385685 NA non-coding downstream 46065 28139438 ~ 28139920 (+)
G385171 LOC106566130 other upstream 184940 27904467 ~ 27904731 (+)
G385053 NA other upstream 382593 27706714 ~ 27707078 (+)
G383794 LOC106566282 other upstream 1426058 26661838 ~ 26663613 (+)
LOC110522865 LOC106567246 other upstream 1628975 26437517 ~ 26502284 (+)
G385805 NA other downstream 323232 28416605 ~ 28417555 (+)
spag8 LOC106566715 other downstream 832904 28926263 ~ 28931410 (+)
tbx5a LOC106566939 other downstream 1648427 29741800 ~ 29763439 (+)
G387516 NA other downstream 1803613 29896986 ~ 29898134 (+)
G388019 NA other downstream 2193578 30286951 ~ 30287824 (+)

Expression


Co-expression Network