XLOC_023364


Basic Information

Item Value
gene id XLOC_023364
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007135.7
NCBI id CM002908.2
chromosome length 42172926
location 15745070 ~ 15749414 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00046849
CGCCAACAGAGTATTATGCTGCATCTAAATTCATGAGTTCGTGCTGTAGCAGTTTAGGTAATGTATTTTCGCGAATGtaaattagtaaaaataataggtttaatCAGATGTGTAGATGAGCACTTTTTTTAAGATCACTCTGAGACAGTTTATATTAGTGAAACACACGTCTGAAATTAATACAGTGAATGCAAAGAAAAAGACAACGAAAAGCATGAAAATGGTGACATCTTGTAAAGACGGCTACATCTGGCAGTGCAAGAAGTCATGTAGACGAATTTGGAAAAGTGTAAGGACGAAGTCTAAATTTTTCCATTCCCATGCAAGTCATTTCAGTTGGATGAAGTGTATTTACAGtatggcAGAGGGCGTTTTGGAGGTCTGTGGAAAAGGAAATCCTGGGTATTTGGAATCGTTGAAATTTTTCCTTCCCGAAAACCTGTTTTGCAGCTGGTGGACAAACGGGACAAGAAGACCCTTATACCAATCATagcaaaacatttcaacaaaGGCAGCATCATTCATAGTGATGAATGGCATGCATACTCAAGTTTTTCAGAGAGGATACCTACATCACACAGTGAACTACAGCATTAGTTTTGTTATTCCATCATCACGGGTACATACACAATACATTGAAAAGGCATAGGCAAACTACAAAAGGGAAGTATGGAGACTGCGTGCAAACCGGACAGAAAAGTCGCTGAAAAACcatctaatatatatagaatGGACTTATTGGTTGGGTAGGAAACACAAACAAGGGATTCTTGGAAGGCTTATACATTACATCAGTCAGCTCtaccagtgtgtgtgtatacagttaaaggtcagaattattagcccccccttgattttatttatttttttttatgttttcaaaatgatgttttaacagattcaggaaatattcacagtatgtctaataatatttttttcttctggagaaagtcttatttgttttatttcagctagaataaaagcagtttttaatttttaaaatccattttaaggtcaaaattattagcccctttaagctatatatttttttagatagtctacagaacaaaccatcattatacaataacttgcctaattaccctaacctgcctagttaccctaattaacctagttcagcctttaaatgtcactttaagctgtatagaagtgtcttgaaaaatatttagtcaaatattatttacagtcatcatgggaaagataaatagagttattaaatctattttgttaAGAAATATGTTGAtgaaatcttccctccattaaacagatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatagagggaagattgttttagcacatttctaagcctaatagttttaaaaacctatttctaataaatggtttattttatctttgccatgatgacagtaaataatatttttcaagacatttttatacagcttaaagtgacatttaaaggcttaaccaggttaataaggtgaactaggcaggttagggtacttaggcaagttattgtataacgatggtttgttctgcagactatcggaaaaaaaaatagcttaaaggggctaataattttgtcccaaaaatgatttaaaaaaattaaaaactactttaattctagccgaaataaaacaaataagactttttccataagaaaaaatattatcagacatactgtgaaaatttccttgctctgttaaacatcattttttttaaaaatcaaaagggggctaataattctgactgtatttcaactgtgtgtgtgtgtgtgtgtg

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00046849 True 1823 lncRNA 0.32 3 15745070 15749414

Neighbor

gene id symbol gene type direction distance location
XLOC_023363 cbln2b coding downstream 96192 15642577 ~ 15648878 (-)
XLOC_023361 cd226 coding downstream 481928 15114092 ~ 15263142 (-)
XLOC_023362 BX950202.1 coding downstream 531085 15213871 ~ 15213985 (-)
XLOC_023360 NA coding downstream 712716 15005512 ~ 15032354 (-)
XLOC_023359 jph1a coding downstream 1032643 14623831 ~ 14712427 (-)
XLOC_023365 CU207257.1 coding upstream 324675 16074089 ~ 16075115 (-)
XLOC_023366 NA coding upstream 397089 16146503 ~ 16147518 (-)
XLOC_023367 NA coding upstream 455374 16204788 ~ 16222786 (-)
XLOC_023368 CR354550.1 coding upstream 805455 16554869 ~ 16554983 (-)
XLOC_023369 mtrr coding upstream 1101799 16851213 ~ 16905018 (-)
XLOC_023665 dre-mir-735 misc upstream 22428547 38177961 ~ 38178027 (-)
XLOC_023357 BX294113.2 non-coding downstream 1208659 14533842 ~ 14536411 (-)
XLOC_023356 NA non-coding downstream 1299934 14441954 ~ 14445136 (-)
XLOC_023354 CR450741.1 non-coding downstream 2135356 13609598 ~ 13609714 (-)
XLOC_023376 NA non-coding upstream 1374996 17124410 ~ 17126986 (-)

Expression


Co-expression Network