XLOC_023367


Basic Information

Item Value
gene id XLOC_023367
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007135.7
NCBI id CM002908.2
chromosome length 42172926
location 16204788 ~ 16222786 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00046850
TCTGTGTCTTTTTCTTTGtgtacttcttttttttattaaccctCTTTTGTTTTGCTTGGCTTTTGATACGGGTGCGCAGCTCTCCGTTGGTGGACGCACCTGTTTCCCATGTCGGGATTAATTGGAGAGGGGATAAAGATGCCAACGAGGAGGCGAAAGGAAGACACAGCTTTAGTGGACCAGCCAGCATTTGATTTTGTGGTTGTTTtcttgtctttctttttttttttgtttctttctggggatttattatttcattcatttgttgtaGGGTAAGCATTTGTTATCGTTATTATTGGGTTTTctggtaaaaaataaattcatttaaaaatgattatgtttactaagtttcttttttttatgttgctttctCTCTGTTTAAAACGAGCTATTATTTTTGAGAGAGGTTGTAAcagggtccttgaacatgctgagtcagatcacaagtgttaaagggtcacgaaacaccaaaacacattttttgagctgttgacagtcgtatatgtgtcccacactgctaaaaacactattaggacacctatatttcactaaaaagtgtaaattggttgtttttgcgttatttcaagcaaattcgtacttccggtttgaaacgaatttttaaagctgcgtcacggtcatgacataatagcgttgtattccagcgtgcagactggacgtctgtgccagagtgtgtcttattacgtcttacagtgtgatgcattaatgcatgagtaaggcttggttcaaaccaatcagcgcgctctattgtgcaacttcattaatattcattagtgtcacc

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00046850 True 799 lncRNA 0.38 2 16204788 16222786

Neighbor

gene id symbol gene type direction distance location
XLOC_023366 NA coding downstream 57270 16146503 ~ 16147518 (-)
XLOC_023365 CU207257.1 coding downstream 129673 16074089 ~ 16075115 (-)
XLOC_023364 NA coding downstream 455374 15745070 ~ 15749414 (-)
XLOC_023363 cbln2b coding downstream 555910 15642577 ~ 15648878 (-)
XLOC_023361 cd226 coding downstream 941646 15114092 ~ 15263142 (-)
XLOC_023368 CR354550.1 coding upstream 332083 16554869 ~ 16554983 (-)
XLOC_023369 mtrr coding upstream 628427 16851213 ~ 16905018 (-)
XLOC_023370 cmbl coding upstream 689462 16912248 ~ 16917086 (-)
XLOC_023371 klhl15 coding upstream 740183 16962969 ~ 16980337 (-)
XLOC_023372 ptgdsb.2 coding upstream 798727 17021513 ~ 17023392 (-)
XLOC_023665 dre-mir-735 misc upstream 21955175 38177961 ~ 38178027 (-)
XLOC_023362 BX950202.1 non-coding downstream 990803 15213871 ~ 15213985 (-)
XLOC_023360 NA non-coding downstream 1172434 15005512 ~ 15032354 (-)
XLOC_023376 NA non-coding upstream 901624 17124410 ~ 17126986 (-)
XLOC_023377 CR376737.1 non-coding upstream 913963 17136749 ~ 17139114 (-)
XLOC_023378 NA non-coding upstream 1010740 17233526 ~ 17236200 (-)
XLOC_023380 NA non-coding upstream 1180684 17403470 ~ 17406483 (-)

Expression


Co-expression Network