Gene
RNA
| Item | Value |
|---|---|
| gene id | G420846 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 58688562 ~ 58688785 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| SH2 domain-containing protein 4B-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU476930 | True | 224 | lncRNA | 0.58 | 1 | 58688562 | 58688785 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110524158 | LOC106613645 | coding | downstream | 12634 | 58671471 ~ 58675928 (-) |
| LOC110524152 | LOC100194657 | coding | downstream | 109951 | 58573258 ~ 58578611 (-) |
| LOC110524151 | LOC106573894 | coding | downstream | 120879 | 58546384 ~ 58567683 (-) |
| mast3b | LOC106613636 | coding | downstream | 213329 | 58416872 ~ 58475233 (-) |
| LOC110524144 | LOC106613635 | coding | downstream | 279242 | 58379780 ~ 58409320 (-) |
| LOC110524167 | LOC106613995 | coding | upstream | 145477 | 58834262 ~ 58836111 (-) |
| gamt | gamt | coding | upstream | 163234 | 58852019 ~ 58856447 (-) |
| LOC118964628 | NA | coding | upstream | 293903 | 58982688 ~ 59001580 (-) |
| trnaa-ugc-13 | NA | coding | upstream | 337741 | 59026526 ~ 59026598 (-) |
| atp13a3 | LOC106613657 | coding | upstream | 366335 | 59055120 ~ 59115105 (-) |
| G420844 | NA | non-coding | downstream | 2642 | 58685579 ~ 58685920 (-) |
| G420843 | NA | non-coding | downstream | 4385 | 58683906 ~ 58684177 (-) |
| G420837 | NA | non-coding | downstream | 17965 | 58670050 ~ 58670597 (-) |
| G420833 | NA | non-coding | downstream | 23603 | 58664692 ~ 58664959 (-) |
| G420832 | NA | non-coding | downstream | 23905 | 58664438 ~ 58664657 (-) |
| G420847 | NA | non-coding | upstream | 151 | 58688936 ~ 58689211 (-) |
| G420850 | LOC106613644 | non-coding | upstream | 3432 | 58692217 ~ 58694635 (-) |
| G420860 | NA | non-coding | upstream | 19997 | 58708782 ~ 58709233 (-) |
| G420879 | NA | non-coding | upstream | 62391 | 58751176 ~ 58753528 (-) |
| G420894 | LOC106613647 | non-coding | upstream | 87196 | 58775981 ~ 58776677 (-) |
| G420421 | NA | other | downstream | 274419 | 58413128 ~ 58414143 (-) |
| G420193 | NA | other | downstream | 574502 | 58112387 ~ 58114060 (-) |
| G419714 | NA | other | downstream | 982626 | 57699745 ~ 57705936 (-) |
| LOC110524128 | LOC107602773 | other | downstream | 1062388 | 57612040 ~ 57627128 (-) |
| G419603 | NA | other | downstream | 1076995 | 57611059 ~ 57611567 (-) |
| G420982 | LOC106613655 | other | upstream | 337318 | 59026103 ~ 59036299 (-) |
| lsg1 | lsg1 | other | upstream | 444085 | 59131152 ~ 59138429 (-) |
| G422347 | NA | other | upstream | 1411980 | 60100765 ~ 60101056 (-) |
| LOC110524239 | LOC106573579 | other | upstream | 2370209 | 61058949 ~ 61081864 (-) |
| G424474 | NA | other | upstream | 2928085 | 61616870 ~ 61617244 (-) |
