G433270



Basic Information


Item Value
gene id G433270
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 70225779 ~ 70226041 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU490648
CccttttagggtatctgaggagtaaaaaGAAACGtgttttgacttgttgaaacaaagtttaggtgTAGATTTTTGGATTCTTTTCTCTGcttgttgaacgagtggattactcaaatcgatggcgccaactaaactgactttttgggatataaagaaggattttatctaacaaaacaacactacatgttattGCTGGGACCCTTTGGGTGACAAATCCGAGGAAggttttcaaaaagtaagtgaatatttaatcgctatttgtg

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU490648 True 263 lncRNA 0.36 1 70225779 70226041

Neighbor


gene id symbol gene type direction distance location
ect2 ect2 coding upstream 318216 69871717 ~ 69907563 (+)
mcf2l2 LOC106613920 coding upstream 356453 69758226 ~ 69869326 (+)
LOC110524452 LOC106613919 coding upstream 480663 69742416 ~ 69745116 (+)
LOC110524448 LOC106613915 coding upstream 522507 69614131 ~ 69703302 (+)
LOC110524446 LOC106613913 coding upstream 681730 69529529 ~ 69544049 (+)
LOC110524461 naaladl2 coding downstream 229424 70455465 ~ 70738345 (+)
si:ch211-51h4.2 LOC106613927 coding downstream 513167 70739208 ~ 70836826 (+)
si:ch211-247n2.1 LOC106613930 coding downstream 756016 70982057 ~ 71012481 (+)
pik3ca pik3ca coding downstream 807979 71034020 ~ 71045983 (+)
lamp3 lamp3 coding downstream 824015 71050056 ~ 71053212 (+)
G433269 NA non-coding upstream 1396 70224169 ~ 70224383 (+)
G433259 NA non-coding upstream 13236 70212232 ~ 70212543 (+)
G433244 NA non-coding upstream 29456 70196047 ~ 70196323 (+)
G433235 NA non-coding upstream 39853 70185488 ~ 70185926 (+)
G433234 NA non-coding upstream 40543 70185037 ~ 70185236 (+)
G433274 NA non-coding downstream 3295 70229336 ~ 70229551 (+)
G433275 NA non-coding downstream 4648 70230689 ~ 70230888 (+)
G433277 NA non-coding downstream 5902 70231943 ~ 70232198 (+)
G433278 NA non-coding downstream 6365 70232406 ~ 70232642 (+)
G433281 NA non-coding downstream 9040 70235081 ~ 70235286 (+)
LOC110524423 LOC106613476 other upstream 2011675 68212224 ~ 68214236 (+)
G430796 LOC106613888 other upstream 2122245 68103179 ~ 68103534 (+)
LOC110524407 LOC106613876 other upstream 2761456 67458540 ~ 67464323 (+)
G429156 NA other upstream 3177615 66981949 ~ 67048164 (+)
G428696 NA other upstream 4083174 66142079 ~ 66142605 (+)
G434653 NA other downstream 733569 70959610 ~ 70959932 (+)
G434792 LOC106613943 other downstream 992748 71218789 ~ 71223578 (+)
G434829 NA other downstream 1072574 71298615 ~ 71298900 (+)
ralgps2 LOC106613957 other downstream 1449830 71552653 ~ 71687963 (+)
G436403 NA other downstream 2277419 72503460 ~ 72504435 (+)

Expression



Co-expression Network