G434650


Basic Information

Item Value
gene id G434650
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 70953483 ~ 70953694 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU492106
tttcaaactgaaATTTGCATCTGAAATTTCCATAAAGTCTATGGAGAATAATGGagaacctcctcccagctgcccactgcactgaggctaggaaacactgtcaccattgataaatccacgataagggagaatttcaataagcatttttctacggctggccatgctttccacctggctacccctaccccggtcaacagccctgcaacctccac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU492106 True 212 lncRNA 0.47 1 70953483 70953694

Neighbor

gene id symbol gene type direction distance location
si:ch211-51h4.2 LOC106613927 coding upstream 116657 70739208 ~ 70836826 (+)
LOC110524461 naaladl2 coding upstream 215138 70455465 ~ 70738345 (+)
nlgn1 nlgn1 coding upstream 605153 70065855 ~ 70348330 (+)
ect2 ect2 coding upstream 1045920 69871717 ~ 69907563 (+)
mcf2l2 LOC106613920 coding upstream 1084157 69758226 ~ 69869326 (+)
si:ch211-247n2.1 LOC106613930 coding downstream 28363 70982057 ~ 71012481 (+)
pik3ca pik3ca coding downstream 80326 71034020 ~ 71045983 (+)
lamp3 lamp3 coding downstream 96362 71050056 ~ 71053212 (+)
LOC110524466 LOC106613934 coding downstream 101875 71055569 ~ 71065158 (+)
impact ycu9 coding downstream 153401 71107095 ~ 71130228 (+)
G434600 NA non-coding upstream 82036 70871224 ~ 70871447 (+)
G434512 NA non-coding upstream 107322 70843785 ~ 70846161 (+)
G434565 NA non-coding upstream 153022 70799657 ~ 70800461 (+)
G433355 NA non-coding upstream 615354 70332364 ~ 70338129 (+)
G434664 NA non-coding downstream 17593 70971287 ~ 70972008 (+)
G434674 NA non-coding downstream 32058 70985752 ~ 70986109 (+)
G434677 NA non-coding downstream 38843 70992537 ~ 70993165 (+)
G434679 NA non-coding downstream 39940 70993634 ~ 70994340 (+)
G434692 NA non-coding downstream 46112 70999806 ~ 71000082 (+)
LOC110524423 LOC106613476 other upstream 2739379 68212224 ~ 68214236 (+)
G430796 LOC106613888 other upstream 2849949 68103179 ~ 68103534 (+)
LOC110524407 LOC106613876 other upstream 3489160 67458540 ~ 67464323 (+)
G429156 NA other upstream 3905319 66981949 ~ 67048164 (+)
G428696 NA other upstream 4810878 66142079 ~ 66142605 (+)
G434653 NA other downstream 5916 70959610 ~ 70959932 (+)
G434792 LOC106613943 other downstream 265095 71218789 ~ 71223578 (+)
G434829 NA other downstream 344921 71298615 ~ 71298900 (+)
ralgps2 LOC106613957 other downstream 722177 71552653 ~ 71687963 (+)
G436403 NA other downstream 1549766 72503460 ~ 72504435 (+)

Expression


Co-expression Network