G437351


Basic Information

Item Value
gene id G437351
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 73491684 ~ 73493525 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU495170
GGTcggtggaaggtagagagagcaagagagagagagtacgtgtGGTcggtggaaggtagagagagagagagagggggacAGGGAAAGCTTTAAATGATGGGAATGAGACAGTTTAATATTCACAGCACTGTTTTCAGGGTGCAGAGTGTTTCACAGTATAGGATTGTTGGAAAAAAGAAGCAGGGAGGTGACAAGCATCAAACGCAGAGAGCCAGACAGTGAGAGCAGATCAGGAtgcagaggggaagagagagagctgggaggaagcagagggagagagaggaggggagagagtgtaAAGGGGCTGTTTAGAAAACACACAGCTGAGAATGAATGTCAATTCCCAGATGACGAGCAGAATTACCATTTCAATCAGGCGGGAGCAGTGTTATTTCTTTCTGCCATAGTGGAGGTGTCAGGGAGCAGGCTGCAGTTAGTGCTGCTTTAAAGCTACTTTAACACCACATTTAGCAGGTAACATCACATTTAGCAGAGTCTATTTCAGGATGGGGGTTGTTATAACTCATTGCAGACATACTTAGAGACCCATAACTGATGTCATCTAATTGTGTACAGCACAGTTCTGACCTTTTAAGTACAAAGGGGGAAACTGGAGGCAGCAGGCCTTAAGAAAGGATCTTTGGGTGAGCCACCATCACCATACTGTATCTTGGTTGAGACCGGAAAAACACGCAAGTTATTTCCCTAACACATTTTTCACAGTAATCCCTTGTTACTTTCTCCCCTCTGTCATGGCTCTGCACTTCCTATTCCAGGAAGCAGGCCCTCCTCCATGAATTTTTCATTTCTATAAACAGTGTCCAACCACGAATTCCTCAAATTCCATACGCGTCTCCTGTCTTTTGCTTCCTTCCTGTGTGTAATGTTTTGGATAGGGGATATGCATTTGTGCTTCATCATGATGTGAATGTCATTGACAGAGATAAGCAGAAGTAGAAAGGGGGTAGTATGCTGGCACTGGGGGATTTAGAGGGGTGCCCTGTTGCCTAACCCATGGAGGTTACATTCCTACATGCTTCGATCTTTCCATAAGAATGCCTTTATAaccattcatttattttatttatttcacctttatttaaccaggtaggctagttgagaacaagttctcatttacaactaaccctaacccccccccccccccccccccccctaaaatcaacaaatgagaatTTAAATTGGGTATAGCAGACAAAAAGGAAGAAATGAAACTTtgtcatcccaattgggagcataaacactagccaaaacaagaggggtagaaaacagttcaccagttactatgacgtatcgtcccttaggatcagcaataacctcagaagctacaaagggagtagctTTATCAACCAAAATGgcagcacctcttgatttactatgaaagttagagtggaacacttgaccaacccagtccctacgcatcctaaaatgctcaccagtcctcaagtgagtctcttgtagaaatgcaacattttcattcaaaccctttaagtgtgTCAACACCCTCTTATGCTTCACCAGGTTATTAACCCCTTTGATGTTCCACGAAATGTACTTGATCGCATTATTTAGGCCCCTCTGGGCATTCCCGTTATAGaaccctgtcattagagcatagaatggaaaagcaatgagCGCCCAAAAACCCCAGAATAACTTGTCTCAGAGTAATAAAGTAATAActaaaaagacagaatgacaacattagaactgaacaattcaccccccc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU495170 True 1747 lncRNA 0.44 2 73491684 73493525

Neighbor

gene id symbol gene type direction distance location
LOC110524525 sel1l3 coding upstream 288990 73191132 ~ 73202694 (+)
mdp1 mgdp1 coding upstream 362113 73126632 ~ 73129571 (+)
LOC110524521 LOC106560235 coding upstream 373590 73113320 ~ 73118094 (+)
LOC110522997 dhcr24 coding upstream 388277 73093650 ~ 73103407 (+)
LOC118964641 NA coding upstream 451282 73037279 ~ 73040402 (+)
LOC110524529 LOC106560251 coding downstream 21418 73514943 ~ 73524397 (+)
cc2d2a cc2d2a coding downstream 31772 73525297 ~ 73557332 (+)
nek1 NA coding downstream 89857 73583382 ~ 73600500 (+)
sh3rf1 LOC106560245 coding downstream 119832 73613357 ~ 73683714 (+)
cbr4 cbr4 coding downstream 189141 73682666 ~ 73690888 (+)
G437336 NA non-coding upstream 22512 73468777 ~ 73469172 (+)
G437312 NA non-coding upstream 47280 73444146 ~ 73444404 (+)
G437303 LOC106560250 non-coding upstream 58001 73431595 ~ 73433683 (+)
G437302 NA non-coding upstream 60766 73430624 ~ 73430918 (+)
G437291 NA non-coding upstream 69094 73422162 ~ 73422590 (+)
G437423 NA non-coding downstream 192951 73686476 ~ 73686746 (+)
G437401 NA non-coding downstream 198331 73691856 ~ 73693829 (+)
G437403 NA non-coding downstream 200655 73694180 ~ 73694804 (+)
G437490 NA non-coding downstream 334341 73827866 ~ 73828171 (+)
G437491 NA non-coding downstream 335137 73828662 ~ 73828866 (+)
G436588 NA other upstream 495949 72995499 ~ 72995735 (+)
G436403 NA other upstream 987249 72503460 ~ 72504435 (+)
ralgps2 LOC106613957 other upstream 1804515 71552653 ~ 71687963 (+)
G434829 NA other upstream 2192784 71298615 ~ 71298900 (+)
G434792 LOC106613943 other upstream 2268106 71218789 ~ 71223578 (+)
LOC110524560 LOC106560270 other downstream 1269679 74729349 ~ 74770168 (+)
G438719 NA other downstream 1278484 74772009 ~ 74776469 (+)
LOC110524571 LOC106560285 other downstream 1677779 75161317 ~ 75178287 (+)
G441903 NA other downstream 3774687 77268212 ~ 77268766 (+)
G442273 NA other downstream 4064805 77558330 ~ 77583227 (+)

Expression


Co-expression Network