LOC118964859


Basic Information

Item Value
gene id LOC118964859
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 31804840 ~ 31806652 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005052063.1
ctctccctctctctctttctctctttcgctctctctccctctctccttctctctctctctctctctgaaaaggACAGTCTATTTTGTGCATATTGTGTGAGGCGGTTTGAGTAAGTGTCCTCTCAGAAATCGACTGTAAActtaggaggaggggaggactggGGAGTCACTGTACTGCTCTAGGTGAAGACTGAGGGAGgtgAAAAGAAGAGAGGGAATGGACTGGGGTgttagagagattgagagagacgttgagagcagagagagagatgagggagagtaTCTGGAGTGGTATGCGGATGAGAGTTTATTTTTAGAGTAGCATTTTATCtttcagcactgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtggagccacAGACCACTGTCCCCTACATACCACTGAGGTCACCGAGAGGCCAGTGttcaagagagggagagagtaaaatgACATTATAACATGCAAATCTCTAATAGAAAAATAATGATCAAACTGGGAGGgagactacaaaaagaaaggaATACTGAGTGTGTAAACTGGGAGGgagactacaaaaagaaaggaATACTGAGTGTGTAAACTGGGAGGgagactacaaaaagaaaggaATACTGAGTGTGTAAACTGGGAGGgagactacaaaaagaaaggaATACTGAGTGTGTAAACTGGGAGGgagactacaaaaagaaaggaATACTGAGTGTGTAAACTGGGAGGGAGACTACAAAAAGTAAGGAATACTGAGTGTGTAAACTGGGAGGgagactacaaaaagaaaggaATACCGAGTGTGTAAACTGGGAGGgagactacaaaaagaaaggaATACTGAGTGTGTAAACTGGGAGGgagactacaaaaagaaaggaATACTGAGTGTGTAAACTGGGAGGgagactacaaaaagaaaggaATACTGAGTGTGTAAACTGGGAGGgagactacaaaaagaaaggaATACTGAGTGTGTAAACTgggagggagactgggagggagactacaaaaagaaaggaATACTGAGTGTGTAAACTGGGAGGgagactacaaaaagaaaggaATACCGAGTGTGTAAACTGGGAGGgagactacaaaaagaaaggaATACTGAGTGTGTAAACTGGGAGGgagactacaaaaagaaaggaATACTGAGTGTGTAAACTGGGAGGgagactacaaaaagaaaggaATACTGAGTGTGTAAACTGGGAGGgagactacaaaaagaaaggaATGCTGAGTGTGTAAACTGGGAGGgagactacaaaaagaaaggaATACTGAGTGTGTAAACTGGGAGGgagactacaaaaagaaaggaATACTGAGTGTGTAAACTGGGAGGgagactacaaaaagaaaggaATACTGAGTGTGTAAACTGGGAGGgagactacaaaaagaaaggaATACCGAGTGTGTAAACTGGGAGGgagactacaaaaagaaaggaATGCCGAGTGTGTAAACTGGGAGGgagactacaaaaagaaaggaATACCGAGTGTGTAAACTGGGAGGAagactacaaaaagaaaggaATGCTGAGTGTGTAAACTGGGAGGgagactacaaaaagaaaggaATACTGAGTGTGTAAACTGGGAGGgagactacaaaaagaaaggaATACTGAGTGTGTAAACTGGGAGGgagactacaaaaagaaaggaATACCGAGTGTGTAAACTGGGAGGgagactacaaaaagaaaggaATACTGAGTGTGTAAACTGGGAGGgagacta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005052063.1 True 1764 mRNA 0.43 2 31804840 31806652

Neighbor

gene id symbol gene type direction distance location
LOC110525757 LOC106585001 coding downstream 46336 31735854 ~ 31758504 (-)
gatc gatc coding downstream 148541 31652136 ~ 31656299 (-)
LOC118936268 ublp coding downstream 163289 31640221 ~ 31641551 (-)
ublp ublp coding downstream 169004 31634776 ~ 31635836 (-)
LOC110525743 LOC106584993 coding downstream 173643 31616647 ~ 31631197 (-)
LOC110525762 LOC106585005 coding upstream 22078 31828730 ~ 31857288 (-)
si:ch211-113d22.2 LOC106585007 coding upstream 53514 31860166 ~ 31864841 (-)
LOC110525764 LOC106585006 coding upstream 60276 31866928 ~ 31903950 (-)
srrd srrd coding upstream 137897 31944549 ~ 31947393 (-)
LOC110525767 LOC106584919 coding upstream 167180 31973832 ~ 31984689 (-)
G496801 NA non-coding downstream 45385 31759147 ~ 31759455 (-)
G496789 NA non-coding downstream 99795 31704664 ~ 31705045 (-)
G496776 NA non-coding downstream 135204 31669254 ~ 31669636 (-)
G496775 NA non-coding downstream 136483 31668033 ~ 31668357 (-)
G496771 NA non-coding downstream 144893 31659480 ~ 31659947 (-)
G496919 NA non-coding upstream 187806 31994458 ~ 31994683 (-)
G496920 NA non-coding upstream 188624 31995276 ~ 31995499 (-)
G496932 NA non-coding upstream 217276 32023928 ~ 32024730 (-)
G496950 NA non-coding upstream 276235 32082887 ~ 32083103 (-)
G496956 NA non-coding upstream 286796 32093448 ~ 32093762 (-)
G496777 NA other downstream 132913 31670978 ~ 31671927 (-)
G496772 NA other downstream 143222 31661393 ~ 31661618 (-)
G495560 NA other downstream 1229267 30575118 ~ 30575573 (-)
G495554 NA other downstream 1255390 30545402 ~ 30549450 (-)
LOC110525714 LOC106585251 other downstream 1277294 30526034 ~ 30527686 (-)
G496851 NA other upstream 36811 31843463 ~ 31892649 (-)
LOC110525784 LOC106585031 other upstream 873390 32680037 ~ 32682899 (-)
G498484 rpl6 other upstream 1520855 33327507 ~ 33330504 (-)
LOC110525812 LOC103397138 other upstream 1525998 33332650 ~ 33336818 (-)
G498960 NA other upstream 2233707 34040359 ~ 34041174 (-)

Expression


Co-expression Network