LOC118965074


Basic Information

Item Value
gene id LOC118965074
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 33193270 ~ 33197445 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005052407.1
TaaaaaggaggaggggagagaggagtcaGGCCCAGCCCCCCAGTaaaaaggaggaggggggggggaagtcAGGCCCAGCCCCCCAgtaaaaaggaggagagaggagtcagGTCCAGCCCCCAGTaaaaaggaggaggggagagaggagtcaGGCCCTGCCCAGGCTATCACGCCTCAGGATATgatccagatgcagacacaggagacggatagtacagttctcagatCATTTATTATAACACGGgggcaggcaaagggcaggtcgaCGGACAGGCAGAGGTTCATAATCAGTTatgaaggcaggcaggctcagctTGTGCCATAAATTAATATGAAAAATTGAGGATTAGCTGATAACTGCAAAACAAACATTCTGGATAATATAGTAAACCTTGAACTATTTATTGATCAGCATTTTGATATGCTCGAAAAAGTATCAGATACATAAAGACAAACAAGagaatACCTTTCCTCAAGCTCTGCGAGCGTAACTGAAGGGAAGTCGCGGtctaaaattaaaaatgtaacatTGGAGGGGGACGTTTTTATAACTACGTCTCCAGAAGAGAGAGTATTACTTACAACAATGACCGAGCAGTTAAAAAAATGGATCTATTGGCTACTGGGGGAGGTTGAGGCCTTaaagaaattttagcaaatgttgtTCACACCagttactgactggttttctgatctacgccAATACCTTTTTTTCAACGTATCTGTGACCAAAAGATGCATATcggtattcccagtcatgtgaaatccatagacggATCCATagagggcctaatgaattcatttcaattgactgatttcttcacATAAACTGTGACTCAGTAAAatccttgaaattg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005052407.1 True 857 mRNA 0.44 2 33193270 33197445

Neighbor

gene id symbol gene type direction distance location
LOC110525800 ergi2 coding downstream 62598 33114696 ~ 33130672 (-)
LOC110525798 LOC106585045 coding downstream 89514 33099066 ~ 33103756 (-)
LOC110525797 LOC106585042 coding downstream 117164 33073701 ~ 33076106 (-)
LOC110525792 LOC106585039 coding downstream 231056 32947034 ~ 32962214 (-)
LOC110525788 LOC106585037 coding downstream 268860 32883925 ~ 32924410 (-)
LOC118965075 NA coding upstream 721 33198166 ~ 33199518 (-)
LOC110525802 LOC106585047 coding upstream 3972 33201417 ~ 33211246 (-)
LOC118964861 NA coding upstream 7874 33205319 ~ 33206241 (-)
LOC110525803 LOC106585048 coding upstream 15940 33213385 ~ 33227655 (-)
LOC110525804 LOC106585049 coding upstream 30368 33227813 ~ 33278199 (-)
G498447 NA non-coding downstream 3872 33189122 ~ 33189398 (-)
G498334 NA non-coding downstream 170229 33014886 ~ 33023041 (-)
G498324 NA non-coding downstream 187634 33005435 ~ 33005636 (-)
G497708 NA non-coding downstream 248523 32944201 ~ 32944747 (-)
G497707 NA non-coding downstream 250776 32942214 ~ 32942494 (-)
G498452 NA non-coding upstream 11651 33209096 ~ 33209696 (-)
G498489 NA non-coding upstream 63932 33261377 ~ 33331621 (-)
G498493 NA non-coding upstream 69088 33266533 ~ 33266855 (-)
G498500 LOC106585050 non-coding upstream 81782 33279227 ~ 33280931 (-)
G498503 NA non-coding upstream 86137 33283582 ~ 33288837 (-)
LOC110525784 LOC106585031 other downstream 510423 32680037 ~ 32682899 (-)
G496851 NA other downstream 1300621 31843463 ~ 31892649 (-)
G496777 NA other downstream 1521343 31670978 ~ 31671927 (-)
G496772 NA other downstream 1531652 31661393 ~ 31661618 (-)
G495560 NA other downstream 2617697 30575118 ~ 30575573 (-)
G498484 rpl6 other upstream 130062 33327507 ~ 33330504 (-)
LOC110525812 LOC103397138 other upstream 135205 33332650 ~ 33336818 (-)
G498960 NA other upstream 842914 34040359 ~ 34041174 (-)
G501142 NA other upstream 2567921 35765366 ~ 35767929 (-)
hk2 LOC106585103 other upstream 3310611 36507843 ~ 36569143 (-)

Expression


Co-expression Network