G501142


Basic Information

Item Value
gene id G501142
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 35765366 ~ 35767929 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU569190
TTATTTTAATGGGAGACATCAGTGCATTCTCATATTTTATTCCTTCTTTACATATAAATAATGCAATACAAAGCGTCTTTGTGAATTAGGCTACTCTATTTACAGTAACTAAAGTTGGTCGCCAGGTGTCATCAGACATGCCCTCCCCAGATGTGGGTTTTAGCGCAAGTTATCATTAGCTGGCGACCTGAAAGTTGAACCCTGACCCCTGTGAGGAACTAAGCATTACATTCTGCAAGGCTGAGGCTGATTCTGCGCTCCCATTTAAGCCCCTAGGCCCAAGGCACTTTTGTCTATCAACAACAATTAACAGAGACATTTCAAACAATACAATAACAAATTAATGTTTGTCATAAATATGATTCTGACTTGTGCGTTTGGGCAGCTTCGTGCAGAAAATACAGGAACTTACTGTTAGATGGGATCAACAACTTTGCCTTGagcccagcagcagcagcctgcTCTCTGGACTGAGTGCCTCGTTAAGATGAGGCATATAGAATAAGGGAGAGAAAGCCTGGCTAAATACACCCAGGCAGTGTGTGTTGGATGGTCCCAGCCTCAGCATGTGTAGTGGGTGATGGAGTCAAGCTGTTCCTGCCGAGCGGGGGGGTCAGGGTCCTTCAGTCAGCACCCCGTCCCTGAACGGAGCACACAGGAATCACCCCTTCCTTCTacacctcctccttcacctctccacccccctcctccacctcttcccctGGTCTGGCTGCATCCCTCGCTCTCCCTGCCTCAACCCCGGGTCCAAATAAACCTGGTAGCGCtgttgctctcctctctcccctccctccatcatcctgAGCAGTGCGCTGTCACTCCCCTCATCAGGATCATTAATCAGGCATGGCAGATTAGAGTTCAAACACAAATAAACCAGCCCAGTGCCCTGCTCTTAGCTCCCCTCAGCTCCACCGTTCCCCACTCCACTCAAACTGCATGACCTGTCCAGCTCAGTCCAGCACTACATAGTTCTCTGCTTTCAGGACTTGTAGGAAAGGATGATTGGGTGAAGAGTGGACTGGTGTACTTGACATGTTGGAAGACTTAAATAGTACGACATCATTTACGTGACTGGTAAAAATCACAATAGTATAATGGCAGTTAAGTGAAATAACAATCGGCCTTATCTCAGAGGGTGATGACTTTGTGGGCTAAACTGCCAGCCGTGTAAATACACAATGTTATCAGTTAGCGCTACAAATGCCTCCATGGTCTCCACATTCATTCCATAACAGACATCTCAATGTGCACCTTGAATGTGCCCGGGCTTATTCATTATACACTGACTTCATTACCCTATCATTTCTTTACTAGCAGGTTTTTCGAAGAAAATAAGAGGACAATACCGCCACCTTCAGGCAGCATTCAGTACTGCCACCACTGTGGCCCAGGCAgtttctttccctccatctctcccataGAGGGATTGGGTTGCCAGAGGTTGCTGGCCAAGGCGTccccacacacagactgacagagatTGTTATTGTAGTCCCACTGTATTCCTTTGTGCATTGGGGTTGAGGGGAggtgagaaggggggggggggggggggggcagagtgcTGGAATGAGTGGAGGCCTAATCAAGGGCTCTGCACTCTGCTCTGCACCTCTCTGACTGACAGCCTGCCCGccgactgtttgtgtgtgtccatggGAAACGGGTGGTGTCACCGCGGCGACGGCCCTTGGCCCATCCATCAGTGTCACCCGGGCAACGCATGTGTCACTTTCAAGACTAATGGACAGGAAGAACAGGAGGAGAAACAACAATATTTGCTGAATATATTTCAGAAACATTAGTTGCCCGGCATTCTCGCTCTTATACAGTTATTTTCAACAAACTGGAATGGGCCCTAATTCTGATTTATGAGCCAGTTTATTTAAAGGATGCTGCTTGTGTCTGGACGTTTTCACGAACCTGGGTCTAGAACTCCTTATGGCCTTCAAAATGGGAGAAGGGgacatactacatacattaagGGGCTAGATTGGGTAACCATGGCCTGGTTAATGTGACCACTAGTCAAAGCTGACACAAATCTAGCCTTACCTAGATATAGCATTGCAGTCATGACCTGGAGGAACCTGCAATGATAAGACGGAGTGGAGACCTGAAATCCAGTGGAACTGGGATGTCAGGGAAAGGAGAGAGTGCTTCTACATGGACCGTTATGAGGTGGCTAGGGTGTATATGCATTACAATTACTTCCCTGTATGCGTCTCTAATGGGACCATATTgcctttctagtgcactacttttgaccagaacactatgggccctggttgaaagtagtacACCACATAGAGAGGAGGGTGACATTAGGGACACATTCCCTGTCTCTACGAGGAGGTTCCTTCCCGTGTGCTCAGGTGTGTTCAGAGAAGGGGGTGCTTAACCTCAGCAGCCGGTAACCGTGGCATCCAGCCCAGAGCGCTTGCTGACGTTGACTTTGGTCAGCTCCTCGGCACAAGTGGGGTGGATCCCCACGGTCTCCTTCAGGTGAGTGAGGGTGGCC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU569190 True 2542 TUCP 0.49 2 35765366 35767929

Neighbor

gene id symbol gene type direction distance location
LOC110525851 LOC106580470 coding downstream 262903 35448724 ~ 35502463 (-)
LOC110525849 dgcr8 coding downstream 319595 35435376 ~ 35445771 (-)
LOC110525850 ranbp1 coding downstream 335949 35423379 ~ 35429417 (-)
LOC118965124 NA coding downstream 340029 35425208 ~ 35425337 (-)
LOC110525847 LOC106585088 coding downstream 437710 35319218 ~ 35327656 (-)
LOC110525855 LOC106585096 coding upstream 53588 35821517 ~ 35831139 (-)
LOC118965023 NA coding upstream 188570 35956499 ~ 35960296 (-)
hk2 LOC106585103 coding upstream 739914 36507843 ~ 36569143 (-)
LOC110525871 LOC106585111 coding upstream 972887 36740816 ~ 36746535 (-)
LOC110525872 LOC106585112 coding upstream 980590 36748519 ~ 36764097 (-)
G501137 txnrd2 non-coding downstream 1221 35760341 ~ 35764145 (-)
G501072 NA non-coding downstream 22538 35739043 ~ 35742828 (-)
G501089 NA non-coding downstream 75648 35689486 ~ 35689718 (-)
G500940 NA non-coding downstream 331927 35433130 ~ 35433439 (-)
G500939 NA non-coding downstream 332549 35432481 ~ 35432817 (-)
G501221 NA non-coding upstream 10257 35778186 ~ 35778465 (-)
G501223 NA non-coding upstream 13284 35781213 ~ 35781561 (-)
G501224 NA non-coding upstream 15358 35783287 ~ 35783630 (-)
G501246 NA non-coding upstream 48840 35816769 ~ 35817096 (-)
G501248 NA non-coding upstream 50830 35818759 ~ 35819079 (-)
G498960 NA other downstream 1724192 34040359 ~ 34041174 (-)
LOC110525812 LOC103397138 other downstream 2428586 33332650 ~ 33336818 (-)
G498484 rpl6 other downstream 2434862 33327507 ~ 33330504 (-)
LOC110525784 LOC106585031 other downstream 3082519 32680037 ~ 32682899 (-)
G496851 NA other downstream 3872717 31843463 ~ 31892649 (-)
vamp8 LOC106585118 other upstream 1282774 37050701 ~ 37065030 (-)
G503064 NA other upstream 1471915 37239844 ~ 37240937 (-)
G503159 LOC106580514 other upstream 1563555 37331484 ~ 37336552 (-)
nsmfb nsmf other upstream 3186941 38926899 ~ 38967540 (-)

Expression


Co-expression Network