LOC118965075


Basic Information

Item Value
gene id LOC118965075
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 33198166 ~ 33199518 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005052408.1
ggttgttgctgcaaatgagaatgtgttcccagtcaatttacctggtaaaataacagataaatacaTTTCAGGATCCATATTTTTGCCTTTTTAAGGTAAAGGACACCTGAATTTATATTTATAGCCTTTTGGAATCAACATTTTACACTAAATATGAACTGATATTTCCTGGGGACAGAAAAGGCACCCCATTGTAGGAATGACCCATCTAGCTGTTTAGGCTCTTCCCACCAGTTGTATATGTTCAAAACCAGTTAGCAACGCATTACTATCAAGTACCGACATACAGTATTTAAATGGGAACTTGTTTCACTCACTTCTTTGTCAATGCTACGCTCTCTTTGTGCGATACATACTGTAGAATTCCTGTCTGTCGAGTGCTGTGAGATGGGGCGACTGAGGAAGAGGCACAACTGGAAGGGACAGAAGCAGGATGTTTCCGAAGAAACAGCCCTGACCAAGAAACAAAGGAAACATCTGCAGAAAGTCCTGGAGGTCAAAGAGAAGAAAGTCAAGATAACATGTTACATCTGCCTTCTCCGAGCCAGACCAGCCCAGTTTCCAGGGCAGACATCCTGACCAAGCTGGGTGAGGTGCAGCTGCCTGACTGAACTAAAGTTGCTTTACACCACCTTAATACTGGGCACAGGAGACAAGCAGTACCAGACCCAACAGTAAGGCAGTGGGACTGTGCCATGCCATTGTAGCAGCAGCATTTGGTTTAGTAACACTTTCCATATGCTCAGGACTGCTGATGAGGTAGTTGACGGAGCCTCAGGGAGTTGGATCAGCAGCCTGCGTGGATTCAACAGGAAGGGGAAACGAAGAGCACAGGAAGAGTAGGCGGAAAAGGAGAAGAGTAGTGGTTGGACTCATAATCTGATGAAGAGGTGGATGATGGAGAATGGAGGGTTGGAGGCCACTGATGTCCCTGAATCTAAAGAGCCGGCCTCCTCCTGTCAGGAGATtgaggtggaggaggtgaaaaaggaaaagaaaagaagagaaaaaggaggagagcagagagaagtcAGGCCCCCCAgtaaaaaggaggagaggagagagaagtcagGCCCCCCAGTaaaaagtaggagaggagagagaagtcagGCCCCCCAGTaaaaagtagga

Function

NR:

description
PREDICTED: probable ATP-dependent RNA helicase DHX37 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005052408.1 True 1131 mRNA 0.46 3 33198166 33199518

Neighbor

gene id symbol gene type direction distance location
LOC118965074 NA coding downstream 721 33193270 ~ 33197445 (-)
LOC110525800 ergi2 coding downstream 67494 33114696 ~ 33130672 (-)
LOC110525798 LOC106585045 coding downstream 94410 33099066 ~ 33103756 (-)
LOC110525797 LOC106585042 coding downstream 122060 33073701 ~ 33076106 (-)
LOC110525792 LOC106585039 coding downstream 235952 32947034 ~ 32962214 (-)
LOC110525802 LOC106585047 coding upstream 1899 33201417 ~ 33211246 (-)
LOC118964861 NA coding upstream 5801 33205319 ~ 33206241 (-)
LOC110525803 LOC106585048 coding upstream 13867 33213385 ~ 33227655 (-)
LOC110525804 LOC106585049 coding upstream 28295 33227813 ~ 33278199 (-)
LOC110526890 cdc45 coding upstream 99151 33298669 ~ 33313304 (-)
G498447 NA non-coding downstream 8768 33189122 ~ 33189398 (-)
G498334 NA non-coding downstream 175125 33014886 ~ 33023041 (-)
G498324 NA non-coding downstream 192530 33005435 ~ 33005636 (-)
G497708 NA non-coding downstream 253419 32944201 ~ 32944747 (-)
G497707 NA non-coding downstream 255672 32942214 ~ 32942494 (-)
G498452 NA non-coding upstream 9578 33209096 ~ 33209696 (-)
G498489 NA non-coding upstream 61859 33261377 ~ 33331621 (-)
G498493 NA non-coding upstream 67015 33266533 ~ 33266855 (-)
G498500 LOC106585050 non-coding upstream 79709 33279227 ~ 33280931 (-)
G498503 NA non-coding upstream 84064 33283582 ~ 33288837 (-)
LOC110525784 LOC106585031 other downstream 515319 32680037 ~ 32682899 (-)
G496851 NA other downstream 1305517 31843463 ~ 31892649 (-)
G496777 NA other downstream 1526239 31670978 ~ 31671927 (-)
G496772 NA other downstream 1536548 31661393 ~ 31661618 (-)
G495560 NA other downstream 2622593 30575118 ~ 30575573 (-)
G498484 rpl6 other upstream 127989 33327507 ~ 33330504 (-)
LOC110525812 LOC103397138 other upstream 133132 33332650 ~ 33336818 (-)
G498960 NA other upstream 840841 34040359 ~ 34041174 (-)
G501142 NA other upstream 2565848 35765366 ~ 35767929 (-)
hk2 LOC106585103 other upstream 3308538 36507843 ~ 36569143 (-)

Expression


Co-expression Network