Gene
RNA
| Item | Value |
|---|---|
| gene id | gadd45ga |
| gene name | LOC106585195 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 41390670 ~ 41392415 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| growth arrest and DNA damage-inducible protein GADD45 gamma-like |
| id | name | namespace |
|---|---|---|
| GO:0051726 | regulation of cell cycle | biological_process |
| GO:0006950 | response to stress | biological_process |
| GO:0005634 | nucleus | cellular_component |
| id | description |
|---|---|
| K04402 | GADD45; growth arrest and DNA-damage-inducible protein |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021606514.2 | True | 1304 | mRNA | 0.47 | 4 | 41390670 | 41392415 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110525030 | NA | coding | downstream | 90688 | 41298126 ~ 41299982 (-) |
| LOC118965078 | NA | coding | downstream | 149836 | 41240023 ~ 41240834 (-) |
| LOC118964868 | NA | coding | downstream | 780760 | 40607825 ~ 40609910 (-) |
| LOC110525965 | LOC106585187 | coding | downstream | 829053 | 40544850 ~ 40561617 (-) |
| LOC110525962 | LOC106585186 | coding | downstream | 852277 | 40533321 ~ 40538393 (-) |
| creb3l3l | LOC106585194 | coding | upstream | 3826 | 41396241 ~ 41404846 (-) |
| nim1k | nim1k | coding | upstream | 13662 | 41406077 ~ 41429279 (-) |
| znf131 | znf131 | coding | upstream | 39236 | 41431651 ~ 41459095 (-) |
| ghra | LOC106585200 | coding | upstream | 82564 | 41474979 ~ 41540150 (-) |
| fbxo4 | fbxo4 | coding | upstream | 169669 | 41562084 ~ 41565993 (-) |
| G507895 | NA | non-coding | downstream | 11184 | 41379244 ~ 41379486 (-) |
| G507894 | NA | non-coding | downstream | 11628 | 41378772 ~ 41379042 (-) |
| G507887 | NA | non-coding | downstream | 21741 | 41367960 ~ 41368929 (-) |
| G507626 | NA | non-coding | downstream | 122345 | 41268023 ~ 41268325 (-) |
| G507605 | NA | non-coding | downstream | 138605 | 41251860 ~ 41252065 (-) |
| G507945 | NA | non-coding | upstream | 71163 | 41463578 ~ 41464095 (-) |
| G507948 | NA | non-coding | upstream | 87740 | 41480155 ~ 41480364 (-) |
| G507953 | NA | non-coding | upstream | 93927 | 41486342 ~ 41486621 (-) |
| G507957 | NA | non-coding | upstream | 97334 | 41489749 ~ 41490032 (-) |
| G507959 | NA | non-coding | upstream | 101707 | 41494122 ~ 41494345 (-) |
| G507063 | NA | other | downstream | 848341 | 40540659 ~ 40542329 (-) |
| G506785 | NA | other | downstream | 1500739 | 39887022 ~ 39889931 (-) |
| LOC110525932 | LOC106585164 | other | downstream | 1552510 | 39826260 ~ 39877951 (-) |
| LOC110525929 | LOC106585162 | other | downstream | 1625894 | 39751726 ~ 39778538 (-) |
| G506641 | NA | other | downstream | 1766326 | 39623685 ~ 39624344 (-) |
| G507906 | selenop | other | upstream | 28609 | 41421024 ~ 41461922 (-) |
| G508303 | NA | other | upstream | 428440 | 41820855 ~ 41821210 (-) |
| G508891 | NA | other | upstream | 751682 | 42144097 ~ 42144885 (-) |
| G509034 | LOC106585214 | other | upstream | 980026 | 42372441 ~ 42403220 (-) |
