G507953



Basic Information


Item Value
gene id G507953
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 41486342 ~ 41486621 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU576618
caataacagcacttacagttcaccgggacagctctagcagggcagaaatttgactaagtggcgtgttggaaaggtggcatcttatgacagtactacgttgaaagtcactgaaatttccagtacgggccattctactgccaatgtttgtctttggtgatttcatggctgtgtgctcgatttgatacacctgtcaccaatgggtgtggctaaaatagcccgaatccactaatttgaaggggtgtccacatacttttgtatctctagcttaaacggacagatt

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU576618 True 280 lncRNA 0.44 1 41486342 41486621

Neighbor


gene id symbol gene type direction distance location
znf131 znf131 coding downstream 27247 41431651 ~ 41459095 (-)
nim1k nim1k coding downstream 57063 41406077 ~ 41429279 (-)
creb3l3l LOC106585194 coding downstream 81496 41396241 ~ 41404846 (-)
gadd45ga LOC106585195 coding downstream 93927 41390670 ~ 41392415 (-)
LOC110525030 NA coding downstream 186360 41298126 ~ 41299982 (-)
fbxo4 fbxo4 coding upstream 75463 41562084 ~ 41565993 (-)
c6h5orf51 LOC106585203 coding upstream 79430 41566051 ~ 41570657 (-)
rgs7bpa LOC106585207 coding upstream 248482 41735103 ~ 41752960 (-)
si:dkey-250l23.4 LOC106584965 coding upstream 272858 41759479 ~ 41769211 (-)
ipo11 ipo11 coding upstream 403238 41889859 ~ 42124064 (-)
G507948 NA non-coding downstream 5978 41480155 ~ 41480364 (-)
G507945 NA non-coding downstream 22247 41463578 ~ 41464095 (-)
G507895 NA non-coding downstream 106856 41379244 ~ 41379486 (-)
G507894 NA non-coding downstream 107300 41378772 ~ 41379042 (-)
G507887 NA non-coding downstream 117413 41367960 ~ 41368929 (-)
G507957 NA non-coding upstream 3128 41489749 ~ 41490032 (-)
G507959 NA non-coding upstream 7501 41494122 ~ 41494345 (-)
G507961 NA non-coding upstream 11519 41498140 ~ 41498410 (-)
ghra LOC106585200 non-coding upstream 34540 41474979 ~ 41540150 (-)
G508141 NA non-coding upstream 74144 41560765 ~ 41561687 (-)
G507906 selenop other downstream 24420 41421024 ~ 41461922 (-)
G507063 NA other downstream 944013 40540659 ~ 40542329 (-)
G506785 NA other downstream 1596411 39887022 ~ 39889931 (-)
LOC110525932 LOC106585164 other downstream 1648182 39826260 ~ 39877951 (-)
G508303 NA other upstream 334234 41820855 ~ 41821210 (-)
G508891 NA other upstream 657476 42144097 ~ 42144885 (-)
G509034 LOC106585214 other upstream 885820 42372441 ~ 42403220 (-)
G509432 NA other upstream 1156898 42643519 ~ 42645869 (-)
G509902 NA other upstream 1590071 43076692 ~ 43077157 (-)

Expression



Co-expression Network