G496775



Basic Information


Item Value
gene id G496775
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 31668033 ~ 31668357 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU564403
CTCGtgtatataggcctaaatgcaggtctgcccctctccctcctgtgaCATCTGGTGTAGAATCCTCTGACTGGAAGTGGGTACCTCATGAGGCGGACCATGGAGTCCATGTCTGTGATGTGTGATTGGTTCCTTCTGAAGATCTGGGTTCGAGGGTTCATGTCCAGAGAGAACCATGGACCAAACTGTTTAACCAGTTCTCGAcagccactggcattaaacacctCCTCAtagtacctacacacacacacacagtgagagagtgtgtgtcacacatacacaggttatttttgttgttgttgatgagaacaaacctgagagacag

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU564403 True 325 lncRNA 0.48 1 31668033 31668357

Neighbor


gene id symbol gene type direction distance location
gatc gatc coding downstream 11734 31652136 ~ 31656299 (-)
LOC118936268 ublp coding downstream 26482 31640221 ~ 31641551 (-)
ublp ublp coding downstream 32197 31634776 ~ 31635836 (-)
LOC110525743 LOC106584993 coding downstream 36836 31616647 ~ 31631197 (-)
ssh1a LOC106584991 coding downstream 60274 31545143 ~ 31607759 (-)
LOC110525757 LOC106585001 coding upstream 67497 31735854 ~ 31758504 (-)
LOC110525759 LOC106585003 coding upstream 132612 31800969 ~ 31824346 (-)
LOC118964859 NA coding upstream 136483 31804840 ~ 31806652 (-)
LOC110525762 LOC106585005 coding upstream 160373 31828730 ~ 31857288 (-)
si:ch211-113d22.2 LOC106585007 coding upstream 191809 31860166 ~ 31864841 (-)
G496771 NA non-coding downstream 8086 31659480 ~ 31659947 (-)
G496652 NA non-coding downstream 242867 31424921 ~ 31425166 (-)
G496650 NA non-coding downstream 244127 31423689 ~ 31423906 (-)
G496640 NA non-coding downstream 258918 31400634 ~ 31409115 (-)
G496624 NA non-coding downstream 297546 31370010 ~ 31370487 (-)
G496776 NA non-coding upstream 897 31669254 ~ 31669636 (-)
G496789 NA non-coding upstream 36307 31704664 ~ 31705045 (-)
G496801 NA non-coding upstream 90790 31759147 ~ 31759455 (-)
G496919 NA non-coding upstream 326101 31994458 ~ 31994683 (-)
G496920 NA non-coding upstream 326919 31995276 ~ 31995499 (-)
G496772 NA other downstream 6415 31661393 ~ 31661618 (-)
G495560 NA other downstream 1092460 30575118 ~ 30575573 (-)
G495554 NA other downstream 1118583 30545402 ~ 30549450 (-)
LOC110525714 LOC106585251 other downstream 1140487 30526034 ~ 30527686 (-)
G494542 NA other downstream 1992460 29675323 ~ 29675573 (-)
G496777 NA other upstream 2621 31670978 ~ 31671927 (-)
G496851 NA other upstream 175106 31843463 ~ 31892649 (-)
LOC110525784 LOC106585031 other upstream 1011685 32680037 ~ 32682899 (-)
G498484 rpl6 other upstream 1659150 33327507 ~ 33330504 (-)
LOC110525812 LOC103397138 other upstream 1664293 33332650 ~ 33336818 (-)

Expression



Co-expression Network