Gene
RNA
| Item | Value |
|---|---|
| gene id | G498649 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 33548283 ~ 33565248 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: piggyBac transposable element-derived protein 3-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU566551 | True | 360 | lncRNA | 0.55 | 2 | 33548283 | 33565248 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110525813 | polb | coding | downstream | 204198 | 33337003 ~ 33344085 (-) |
| LOC110525812 | LOC103397138 | coding | downstream | 211465 | 33332650 ~ 33336818 (-) |
| LOC110525810 | NA | coding | downstream | 226427 | 33320253 ~ 33321907 (-) |
| LOC110526890 | cdc45 | coding | downstream | 234979 | 33298669 ~ 33313304 (-) |
| LOC110525804 | LOC106585049 | coding | downstream | 270084 | 33227813 ~ 33278199 (-) |
| LOC110526891 | NA | coding | upstream | 4757 | 33570005 ~ 33576547 (-) |
| LOC118965076 | NA | coding | upstream | 24608 | 33589856 ~ 33593095 (-) |
| si:ch211-127m7.2 | LOC106585066 | coding | upstream | 159370 | 33724618 ~ 33730221 (-) |
| LOC110525826 | NA | coding | upstream | 208811 | 33774059 ~ 33778109 (-) |
| LOC110525825 | rasf2 | coding | upstream | 212961 | 33778209 ~ 33792523 (-) |
| G498630 | NA | non-coding | downstream | 28359 | 33519704 ~ 33519924 (-) |
| G498625 | NA | non-coding | downstream | 32679 | 33515272 ~ 33515604 (-) |
| G498621 | NA | non-coding | downstream | 39495 | 33505279 ~ 33508788 (-) |
| G498546 | NA | non-coding | downstream | 146737 | 33401333 ~ 33401546 (-) |
| G498543 | NA | non-coding | downstream | 150465 | 33397584 ~ 33397818 (-) |
| G498756 | NA | non-coding | upstream | 133925 | 33699173 ~ 33744708 (-) |
| G498619 | NA | non-coding | upstream | 185358 | 33750606 ~ 33750988 (-) |
| G498787 | NA | non-coding | upstream | 188308 | 33753556 ~ 33753885 (-) |
| G498746 | NA | non-coding | upstream | 228523 | 33793771 ~ 33798807 (-) |
| G498833 | NA | non-coding | upstream | 386821 | 33952069 ~ 33952604 (-) |
| G498484 | rpl6 | other | downstream | 217779 | 33327507 ~ 33330504 (-) |
| LOC110525784 | LOC106585031 | other | downstream | 865436 | 32680037 ~ 32682899 (-) |
| G496851 | NA | other | downstream | 1655634 | 31843463 ~ 31892649 (-) |
| G496777 | NA | other | downstream | 1876356 | 31670978 ~ 31671927 (-) |
| G498960 | NA | other | upstream | 475111 | 34040359 ~ 34041174 (-) |
| G501142 | NA | other | upstream | 2200118 | 35765366 ~ 35767929 (-) |
| hk2 | LOC106585103 | other | upstream | 2942808 | 36507843 ~ 36569143 (-) |
| vamp8 | LOC106585118 | other | upstream | 3485455 | 37050701 ~ 37065030 (-) |
| G503064 | NA | other | upstream | 3674596 | 37239844 ~ 37240937 (-) |
