XLOC_024355 (CABZ01113818.1)


Basic Information

Item Value
gene id XLOC_024355
gene name CABZ01113818.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007136.7
NCBI id CM002909.2
chromosome length 37502051
location 222921 ~ 225964 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00048177
ATGGGGAAGCGTTTTGTTGCGATGAAGGTGGTGAAGAGTGCGCAGCACTACACGGAGACGGCACTAGATGAAATTAAACTACTCCGATGTgtgCGTGAGACTGATCCTGAAGATCCTAATAAAGACATGGTGGTTCAACTCATAGACGACTTCAAGATCTCCGGGGTGAACGGGATACACGTGTGTATGGTGTTTGAAGTTCTCGGTCATCATTTGCTGAAGTGGATCATCAAGTCTAATTATCAGGGCTTGCCGTTACCCTGCGTCAAGAGCATCATCAGACagGTGCTGCAGGGCCTGGATTACCTGCACAGTAAGTGTAAGATCATCCACACAGACATCAAGCCGGAGAACATCCTGATGTGTGTGGACGACGCGTTCGTGCGGCGCATGGCGGTGGAGGCCACGGAGTGGCAGAAAGCAGGAGCGCCGCCGCCCTCAGGATCCGCAGGTACACCTGTCTGTCTGATTGTGCGCACATGA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000110142

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00048177 True 483 mRNA 0.52 5 222921 225964

Neighbor

gene id symbol gene type direction distance location
XLOC_024353 FP236318.3 coding downstream 12191 207422 ~ 210730 (-)
XLOC_024351 FP236318.5 coding downstream 15707 196313 ~ 207214 (-)
XLOC_024352 FP236318.4 coding downstream 18902 202323 ~ 204019 (-)
XLOC_024350 CABZ01114053.1 coding downstream 49756 172331 ~ 173165 (-)
XLOC_024349 NA coding downstream 56941 160873 ~ 165980 (-)
XLOC_024356 CU855936.1 coding upstream 28498 254462 ~ 255971 (-)
XLOC_024357 CABZ01072254.1 coding upstream 39396 265360 ~ 269284 (-)
XLOC_024358 NA coding upstream 46494 272458 ~ 276103 (-)
XLOC_024359 NA coding upstream 50167 276131 ~ 277363 (-)
XLOC_024360 NA coding upstream 61695 287659 ~ 294609 (-)
XLOC_024348 NA non-coding downstream 84773 137544 ~ 138148 (-)
XLOC_024361 NA non-coding upstream 79044 305008 ~ 305657 (-)
XLOC_024363 NA non-coding upstream 134574 360538 ~ 363768 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000256_00042139_00049433 NA coding CI01000256 null 41383 ~ 50689 (+)
bowfin (Amia calva) AMCG00013843 NA coding CM030125.1 CM030125.1 45359187 ~ 45373711 (-)