XLOC_024359


Basic Information

Item Value
gene id XLOC_024359
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007136.7
NCBI id CM002909.2
chromosome length 37502051
location 276131 ~ 277363 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00049067
GGAAAAACCAAAACTACAGCCCGAGGAAGATGAAGAACTCAATAAAAACAGCAGAGATGAAGAGGAAAAGGGAGAACAGCATCCAGATGAAAAGGAAGATCTGAAAGAAAAGTTATCAATAACTGAAATTATTTCATACTCAAAAAGATGGAAAGGCACAATAAAGAGAGGTAAGACCTATTTGACAAGGGCGTAGCTTTGCTTTTGATGTTGGTGAGGATGTAATGCTTtgaaatattgagttactccccaaagaTCTTTTTATGGCAAGTAATGTGTTTcattacttttgcgttactttttctgacttactgaggcttgatctctgcaGTCAACAACACTATAACcttcatttactgtaaaaatcagtcataataataaagaataatgtCATCTAATGAAAGCTTCCTGAGGCAGAGCTCTACATGCCATGTACAGATTAATGACAGCGTAAAGCGGTGTGTTTGCTGTTTTTAGTCTCATTAGTGCAGTAAATCAGTGTGCACTGAGACTATAACACCTTTTTCCTTTTCTCCATGTGTTCAGAATAACGAGAATACTTCCAGCTTTGTAGTAATGTAAGCCAAAGCCATCCTGCTTTCTGTCTGCCGTCTCTAATGGATTCAGTGTGACCTCGCTCAATTAAATTCagctatttttttaagttattttttttaaaggaactcaaatattattactattttttaatgTAGGCTGATGtcttactttacttgttacttagaaaaatCATATTATTATGCAACTCATAGTACTTGATGCGGTTGCCCAAACACTAGAGGCGTGCGATGCAATAACATTGTGTCTTGACTGctgctgttttattttaatcattaatgACAGTTGACTGagcatttgcattattattatgggATATTTCAATAATCTGTGGCTATTGATACTCTGATCAAGCTAATTCTACGCCCTTGCTATTTGAAATAACCGATCCTTCATTTAAGGggactttatttatatttaataaatgccgccttgatgaacaaaataatttaataaaagaattctaatcaaatttttaataaaataataaataaactgaccccaaacttttgattgGTGGTGTAGATCAGTGGgttagtttattaaaataatttaa

Function

GO:

id name namespace
GO:0045595 regulation of cell differentiation biological_process
GO:0050767 regulation of neurogenesis biological_process
GO:0007399 nervous system development biological_process
GO:0060284 regulation of cell development biological_process
GO:0051960 regulation of nervous system development biological_process

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00049067 True 1132 lncRNA 0.34 2 276131 277363

Neighbor

gene id symbol gene type direction distance location
XLOC_024358 NA coding downstream 28 272458 ~ 276103 (-)
XLOC_024357 CABZ01072254.1 coding downstream 6847 265360 ~ 269284 (-)
XLOC_024356 CU855936.1 coding downstream 20160 254462 ~ 255971 (-)
XLOC_024354 CU855936.2 coding downstream 31868 217686 ~ 244263 (-)
XLOC_024355 CABZ01113818.1 coding downstream 50167 222921 ~ 225964 (-)
XLOC_024360 NA coding upstream 10296 287659 ~ 294609 (-)
XLOC_024361 NA coding upstream 27645 305008 ~ 305657 (-)
XLOC_024362 prickle1a coding upstream 37245 314608 ~ 348784 (-)
XLOC_024363 NA coding upstream 83175 360538 ~ 363768 (-)
XLOC_024364 szl coding upstream 93801 371164 ~ 375882 (-)
XLOC_024349 NA non-coding downstream 110151 160873 ~ 165980 (-)
XLOC_024348 NA non-coding downstream 137983 137544 ~ 138148 (-)
XLOC_024366 NA non-coding upstream 177956 455319 ~ 456478 (-)
XLOC_024369 NA non-coding upstream 353570 630933 ~ 643106 (-)

Expression


Co-expression Network