si:ch211-222l21.1


Basic Information

Item Value
gene id si:ch211-222l21.1
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 44291263 ~ 44294096 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021609397.2
GAAGATTGACAACAATCTGTCCAATAAGAACCGCTTTAGCGTGTTTGTTACTTTAGATTGTCCAATTACGTTTTAGATCGACGGTCTTCATTCTAACTAATGGACTACAGTTGAGCCTAACAGATGTCGCTGGTGTTCATAACTCTCTCCTCAGCGTGTCATTGAAACAGGCTTATATCACTGCCATACACATCAAACTAAGTATTTATTTCGGAAGTATATTATACCCTTAAATTAAACTAGCTATGGCTGATACCGCAGTAGAGACGACCACAACCACCGAGATTTCAGCAAAGGAGCTTAAAGAGAAGAAAGAGGTTACCGAGGAGGTGATGGTGGAGAAGAAGGAGAACGGCAGTGGGGACGTACCTGGCAATGAAACACACACAAATGGTGCAGAGGAGACAAATGGTGCAAAGGAGAAGACAAATGGTGCAATTCATTCTGAAGTAACTCCAGAGGTTGAAGAGGATGgagagggagaggatgcaGAAGAAGATGCAGAAGAAGCTGCTGATGAGGAGGTTGACCACCCTGTGAAGCGCCCAGCTGAGGAGGAGGAACAAGgggaaacaaaaaaacagaaaacagaaaacgaTGACTCAAAGGAAGCTGAAGTGGAGGCCTAGAACACTCCGCCTGTACCCTTCCGCAGCTCTGTCTACATGACGTTGTCAACTTCACCTTGTAGAGCTTGTGCTTTATGTATGTTTTACAGATTTTGTTTGCCCCCAAGATATTACATTGCACTGGAGTCCTTAAACATAGTGGCCTCCTCCCTTTTTTTATAAGATGTTATTTATTGGTTTCTTACGCAAAAAAAACTTGTGCAAATAGGATCCATGCTGTTTTATCAGTATGTTAGTTTGTGTCTGTATGAGTTAAGCACATTCTCTACGTTGTTACTGCTGACCAGTTGATTCAGGCAGGCAGCTGCACCCTTCTCCACATTTTCAAGGTGACCTCAGACTCACTAAAGACCAAAGATAAGTTTTAAGCAGGGGCTAATGGACTATTGTTAGCATTATTAGTTCAGGCTTTTTTAATACCTTTTGTTTAGTGCTGCTGCTAGTAGTTAATCCTTTGTCTGACTGATCTGTTAACACAACAATGGCACAAATAAAATAACACCTCCGTGATCAAAGATGGCTTGATCCTGTTTAGGGGTCTGGCTTCTGCAATGTTAATTACCCCCTGTTAATTCTTAAGGCGTTGGTCATATGTTTTGTATGCATTTTAAAACAAGTTTGTACCCAAGATACtgtttttctgttttattttCAGTTATTTTTTGTCTGGTTGACTCAAATTGTCTACAATGGTCTTTATCAGAACAACATTCCCAACCTAGTGTTCTTTCTCTTCTAGTGCAGTTATATTTCATGATTGCTTTGGCCACTGCTTTGTATATTCTGGTTGTTGATGATTAAATAAGTCAGTCTTGTCTTTTTAA

Function

NR:

description
prothymosin alpha-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021609397.2 True 1453 mRNA 0.40 5 44291263 44294096

Neighbor

gene id symbol gene type direction distance location
prxl2b fam213b coding downstream 21958 44261628 ~ 44269305 (-)
LOC110527840 miip coding downstream 107059 44136185 ~ 44184204 (-)
si:dkeyp-61b2.1 LOC106582824 coding downstream 115172 44163371 ~ 44176091 (-)
tnfrsf1b LOC106582823 coding downstream 126830 44157058 ~ 44164433 (-)
LOC110527835 LOC106582822 coding downstream 145296 44103834 ~ 44145967 (-)
LOC110527846 LOC106582831 coding upstream 21407 44315503 ~ 44320470 (-)
ghrh LOC106582839 coding upstream 292214 44586310 ~ 44590398 (-)
lbp/bpi-1 lbp/bpi-1 coding upstream 301663 44595759 ~ 44602923 (-)
LOC110527856 LOC106582843 coding upstream 311965 44606061 ~ 44607348 (-)
LOC118965287 LOC106582968 coding upstream 314701 44608797 ~ 44610332 (-)
G611508 NA non-coding downstream 55742 44235217 ~ 44235521 (-)
G611502 NA non-coding downstream 63577 44227445 ~ 44227686 (-)
G611499 NA non-coding downstream 67537 44223451 ~ 44223726 (-)
G611489 NA non-coding downstream 85597 44205461 ~ 44205666 (-)
G611486 NA non-coding downstream 90418 44200548 ~ 44200845 (-)
G611580 NA non-coding upstream 51281 44345377 ~ 44373823 (-)
G611591 NA non-coding upstream 56615 44350711 ~ 44351469 (-)
G611629 NA non-coding upstream 109072 44403168 ~ 44406788 (-)
G611611 NA non-coding upstream 130551 44424647 ~ 44425495 (-)
G611585 LOC106582832 non-coding upstream 139823 44433919 ~ 44434142 (-)
G610570 LOC106582807 other downstream 711299 43579093 ~ 43579964 (-)
LOC110527816 LOC106582802 other downstream 754298 43526691 ~ 43537037 (-)
LOC110527812 LOC106582796 other downstream 852350 43435578 ~ 43439076 (-)
G610183 NA other downstream 1123943 43127811 ~ 43167320 (-)
G611674 NA other upstream 190759 44484855 ~ 44485752 (-)
G613411 LOC106582852 other upstream 1580869 45874965 ~ 45875700 (-)
LOC110527888 LOC106582868 other upstream 2974227 47260325 ~ 47284791 (-)
G616880 NA other upstream 4192951 48487047 ~ 48529168 (-)
G617624 LOC106582928 other upstream 4890328 49184424 ~ 49186096 (-)

Expression


Co-expression Network