ppp4r2b (LOC106582851)


Basic Information

Item Value
gene id ppp4r2b
gene name LOC106582851
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 45725312 ~ 45731514 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021609450.2
TTGGGGTTCTTATGAATAACACTTTGACAATAAAGGGAAGAAAGAAGTGGCACCACTGCTCGACCAGTTTCTGTGTCATGTTGCGAAGACTGGAGAAACCATTGTTCAGTGGTCTCAGTTTAAAAGCTATTTCCTCTTCAAACTGGAGAAGGTGATGGACGACTTCAATGCCTCAGCACCCGATCAAAGGGGGGTAGCCAATCCCAATGTGGACTCCATTCCATTTGAGGACATGAAGGAGAGGATACTGAAGATTGTGAATGGATACAATGGAATTCCATTTACGATTCAGCGTTTGTGTGAGCTGCTTACAGAACCCAAGAGAAATTACACAGGGACAGAGAAATTCCTCAGAGGTGTTGAGAAGAATGTGATGGTGGTCAGCTGTGTGCATCCTACTTCAGAGAAAAACGGATGCAGTGGTGTGAATAGAATGAATGGTGTTATGTTGCCTGGGAACGCATCTGCTTTTACGGAGAGGAAAGTGAATGGCCCAGGGACCCCCAGGCCGCTGAACAGACCAAAGCTCTCTCTAGCGACAAACGGCCTACCGGACAGTACAGAAAACAAAGACCCTACCATAGAGCAGGGACATGACAAACCCTCCAGTGAGGTGTCGGCATCAGGTACCCAGGGGAGCTCTGTGAAGAACAAGCACCATGACGACGAGGAAGAAGAGGATATGGAGGCGGAGCAACACGAGGTGAAGAGGCTCAAGTTCAGCAAAGAGGATGAGCAGGAGGGGGACACCCTCAGACACGGCAACAATGACAGTTTGTCGGAAGAGGCAGAGTCTATGGTCCAGGAGGAGGATGACGAGAAGAGAAGTGAGGCTCCCAGTACTGCTGGGACTTGTGAAGACCAAGAGCCATCGAGCACACAGTTGGAGCCATCAGCAGGGCCCGGGGAGGACgagcaggcagagagggaggttcCTTGTGGCTCCCAAGAGGAATGTAATGACATGGACCAGTCAGAACAGCAGGCCCCTGCTGGCGTCCTGGAGAGCCCTGAGGCCCGGGAAAGCGATGAGGGCAGTGACCcagtcagcagcagcagtagtgtcagcagcagtagcagtgagGAGAGTGGAGCCAGGGAAGAGAGAGCCTCTGCTCCCTCCAGCAGTACTTCTGAGCCACCTGCAGAGGGCGCCATGGAGAGCGGTAGCCTGGACACTGGGACCAGTGAGGAGCCCATGGAGCAGGACTAGGATCTCAGTATCCATCTGTTGACTATTCAGAACATCTGTCCTCAAGTCCAGCTTGAGTGTCACCGGTGAAGGGGATGCGCCATCCTGGTTCCCTAGATACTTTACGCCTTGTCTACATTTTGGGCACTCCTCAAAATGACCACCTGATGTGGGcataaacattttttattttgaatcaAATACaaactggattttttttcctacaCTATTTAGAGTTTTCATTTTAAGGCTTGTGGTCTCTGGAGGTCTTTGTTTCAGCCTTGATCAGTCTTTGGGGTTTCAGATGATGTTTGTTGTGGCTGTGCTGATAGGTCGGGGTGTTCATCTGGCTTTTTTCCCTCATCAGTTTAAGCATTTGTCAGGAAAAGTAAACCAGGCAGTTTTTTTCCCTGTAGCCAGTTTCTCTCTGTGGATTATCACCTCTGCCACACCAGAGTCGAGACAAAGCTATCGCCGCTAATTAACTTCCTCATTATTTATGCTCGGTTAATCACCTCGGCGATGAACTAGCTAGAATCATTTCTGTTTCTGACTGAAGCACAAGCCTTAGCATCCAGCTCATACCACTGTTTTTACTCGTGCCGCCATCTTGGTTGTTGAAAAAATGTATATTTCCTTGTTTGTTTGTTCCCCCCCCCCATACATTTTCCTCGTGAGTTGGGAGTATTGAAATAGATTTTCCATGTGTCCTTATTCTCCTTTTTAATTGCATCTATTTTCTTTGCGATGATACACTACCGACCCAACTCAGAGTAATATAACATGCTACCTTTTACCttaaaatgtaacatatcatttTGGGTGCATTGAACCATCATTTATATGAACAGTTCAACTGAATTACTTATTTTGGAAAATATGTTTTTTGACAGCCAGTTATTTCATTTCCAAAACCAGCTGTAAGTACAAAGATGACTTCTGCtttgtattgtgatgtcaccaaGTTGTTTGACTGACAGATATCCAGAGCATTTACTGGTTACCAGCTTTACACCTGTTTCTGCAGCTGTACTTTTTGATATGTAGAATTTTAAATTTCTGTAAAGTAGATTTTTGTAGATTGTGATACAGTATATGTTCACTGCCTTTGTGAAACCATATATAATTGTATAGTTTGTGTATGCTCTGAATGATTGGGCTTTCAATGCGGTATTCAGATAAagcaataaatgtaaaaaaaaaa
>XM_021609449.2
TACCATAATCCTTACATACTAACCTTAAAACCATTTAGATTTCAACTTCAATGTGGGCtatggacgtcccaaggatcccagggAGGACGAACCCACTATTTTTTTGTGTTGAACGCAGCCACCACTAGTCTGCCTCTTGCTCCAAGAGattgacagaggacaacaacatgaTGGAAATTGACTCACTTCAAGAGGCGCTTAAAGACTTTGACAATAAAGGGAAGAAAGAAGTGGCACCACTGCTCGACCAGTTTCTGTGTCATGTTGCGAAGACTGGAGAAACCATTGTTCAGTGGTCTCAGTTTAAAAGCTATTTCCTCTTCAAACTGGAGAAGGTGATGGACGACTTCAATGCCTCAGCACCCGATCAAAGGGGGGTAGCCAATCCCAATGTGGACTCCATTCCATTTGAGGACATGAAGGAGAGGATACTGAAGATTGTGAATGGATACAATGGAATTCCATTTACGATTCAGCGTTTGTGTGAGCTGCTTACAGAACCCAAGAGAAATTACACAGGGACAGAGAAATTCCTCAGAGGTGTTGAGAAGAATGTGATGGTGGTCAGCTGTGTGCATCCTACTTCAGAGAAAAACGGATGCAGTGGTGTGAATAGAATGAATGGTGTTATGTTGCCTGGGAACGCATCTGCTTTTACGGAGAGGAAAGTGAATGGCCCAGGGACCCCCAGGCCGCTGAACAGACCAAAGCTCTCTCTAGCGACAAACGGCCTACCGGACAGTACAGAAAACAAAGACCCTACCATAGAGCAGGGACATGACAAACCCTCCAGTGAGGTGTCGGCATCAGGTACCCAGGGGAGCTCTGTGAAGAACAAGCACCATGACGACGAGGAAGAAGAGGATATGGAGGCGGAGCAACACGAGGTGAAGAGGCTCAAGTTCAGCAAAGAGGATGAGCAGGAGGGGGACACCCTCAGACACGGCAACAATGACAGTTTGTCGGAAGAGGCAGAGTCTATGGTCCAGGAGGAGGATGACGAGAAGAGAAGTGAGGCTCCCAGTACTGCTGGGACTTGTGAAGACCAAGAGCCATCGAGCACACAGTTGGAGCCATCAGCAGGGCCCGGGGAGGACgagcaggcagagagggaggttcCTTGTGGCTCCCAAGAGGAATGTAATGACATGGACCAGTCAGAACAGCAGGCCCCTGCTGGCGTCCTGGAGAGCCCTGAGGCCCGGGAAAGCGATGAGGGCAGTGACCcagtcagcagcagcagtagtgtcagcagcagtagcagtgagGAGAGTGGAGCCAGGGAAGAGAGAGCCTCTGCTCCCTCCAGCAGTACTTCTGAGCCACCTGCAGAGGGCGCCATGGAGAGCGGTAGCCTGGACACTGGGACCAGTGAGGAGCCCATGGAGCAGGACTAGGATCTCAGTATCCATCTGTTGACTATTCAGAACATCTGTCCTCAAGTCCAGCTTGAGTGTCACCGGTGAAGGGGATGCGCCATCCTGGTTCCCTAGATACTTTACGCCTTGTCTACATTTTGGGCACTCCTCAAAATGACCACCTGATGTGGGcataaacattttttattttgaatcaAATACaaactggattttttttcctacaCTATTTAGAGTTTTCATTTTAAGGCTTGTGGTCTCTGGAGGTCTTTGTTTCAGCCTTGATCAGTCTTTGGGGTTTCAGATGATGTTTGTTGTGGCTGTGCTGATAGGTCGGGGTGTTCATCTGGCTTTTTTCCCTCATCAGTTTAAGCATTTGTCAGGAAAAGTAAACCAGGCAGTTTTTTTCCCTGTAGCCAGTTTCTCTCTGTGGATTATCACCTCTGCCACACCAGAGTCGAGACAAAGCTATCGCCGCTAATTAACTTCCTCATTATTTATGCTCGGTTAATCACCTCGGCGATGAACTAGCTAGAATCATTTCTGTTTCTGACTGAAGCACAAGCCTTAGCATCCAGCTCATACCACTGTTTTTACTCGTGCCGCCATCTTGGTTGTTGAAAAAATGTATATTTCCTTGTTTGTTTGTTCCCCCCCCCCATACATTTTCCTCGTGAGTTGGGAGTATTGAAATAGATTTTCCATGTGTCCTTATTCTCCTTTTTAATTGCATCTATTTTCTTTGCGATGATACACTACCGACCCAACTCAGAGTAATATAACATGCTACCTTTTACCttaaaatgtaacatatcatttTGGGTGCATTGAACCATCATTTATATGAACAGTTCAACTGAATTACTTATTTTGGAAAATATGTTTTTTGACAGCCAGTTATTTCATTTCCAAAACCAGCTGTAAGTACAAAGATGACTTCTGCtttgtattgtgatgtcaccaaGTTGTTTGACTGACAGATATCCAGAGCATTTACTGGTTACCAGCTTTACACCTGTTTCTGCAGCTGTACTTTTTGATATGTAGAATTTTAAATTTCTGTAAAGTAGATTTTTGTAGATTGTGATACAGTATATGTTCACTGCCTTTGTGAAACCATATATAATTGTATAGTTTGTGTATGCTCTGAATGATTGGGCTTTCAATGCGGTATTCAGATAAagcaataaatgtaaaaaaaaaa

Function

NR:

description
serine/threonine-protein phosphatase 4 regulatory subunit 2-B-like isoform X1

GO: NA

KEGG:

id description
K15425 PPP4R2; serine/threonine-protein phosphatase 4 regulatory subunit 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021609450.2 False 2396 mRNA 0.46 9 45725312 45731306
XM_021609449.2 True 2580 mRNA 0.46 9 45725312 45731514

Neighbor

gene id symbol gene type direction distance location
chl1b LOC100380675 coding downstream 412335 45236873 ~ 45312977 (-)
LOC110527866 LOC106582846 coding downstream 553906 45085520 ~ 45171406 (-)
cntn4 LOC106582845 coding downstream 743661 44803009 ~ 44981651 (-)
LOC118936679 LOC106607655 coding downstream 1066556 44657459 ~ 44658756 (-)
LOC110527858 LOC106582773 coding downstream 1095600 44627888 ~ 44629712 (-)
LOC110527871 LOC106582850 coding upstream 2843 45734357 ~ 45750837 (-)
gpr27 LOC106582853 coding upstream 237916 45969430 ~ 45972012 (-)
LOC110528957 LOC106565741 coding upstream 586015 46317529 ~ 46333627 (-)
LOC110527878 LOC106582858 coding upstream 610474 46341988 ~ 46374962 (-)
praf3 praf3 coding upstream 725501 46457015 ~ 46460324 (-)
G613307 NA non-coding downstream 19508 45705586 ~ 45705804 (-)
G612915 NA non-coding downstream 214886 45510157 ~ 45510426 (-)
G612891 NA non-coding downstream 236126 45485492 ~ 45489186 (-)
G612743 NA non-coding downstream 328815 45396039 ~ 45396497 (-)
G612731 NA non-coding downstream 335926 45389122 ~ 45389386 (-)
G613410 NA non-coding upstream 140856 45872370 ~ 45900132 (-)
G613820 NA non-coding upstream 394346 46125860 ~ 46129320 (-)
G613821 NA non-coding upstream 398845 46130359 ~ 46139862 (-)
G613880 LOC106582854 non-coding upstream 466328 46197842 ~ 46198275 (-)
G613881 NA non-coding upstream 473507 46205021 ~ 46209544 (-)
G611674 NA other downstream 1239560 44484855 ~ 44485752 (-)
G610570 LOC106582807 other downstream 2145348 43579093 ~ 43579964 (-)
LOC110527816 LOC106582802 other downstream 2188347 43526691 ~ 43537037 (-)
LOC110527812 LOC106582796 other downstream 2286399 43435578 ~ 43439076 (-)
G610185 NA other downstream 2568223 43151570 ~ 43157089 (-)
G613411 LOC106582852 other upstream 143451 45874965 ~ 45875700 (-)
LOC110527888 LOC106582868 other upstream 1536809 47260325 ~ 47284791 (-)
G616880 NA other upstream 2755533 48487047 ~ 48529168 (-)
G617624 LOC106582928 other upstream 3452910 49184424 ~ 49186096 (-)
G617632 NA other upstream 3464090 49195604 ~ 49195970 (-)

Expression


Co-expression Network