XLOC_025400 (TMEM114)


Basic Information

Item Value
gene id XLOC_025400
gene name TMEM114
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 27929505 ~ 27952302 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00050107
ctattattatgttttattgatGAATGAtatgatattaaataatatatgatatgttatttatatttttattattataaatttttattatacaGTATAGTAGCCTAtgtatgttctttttttaaatgtacattttataaatgctttggcaatacatttgtaacatttgtcatgccaataaagcaattattaaatCGACttgaaatgagagagagagagagagagacttgaaatgagagagagagagagggagagagagagagagggagagagaagctTATTATCGCCCTCTTTTGGTCATACATTCACCCTGTAGAAGCGGGTAACGGATAAACAGCAGCGCATCCAGCAATAGGCTTCCAGATGGACAGCGCTGAGGGAAAAGACACACTCGAACTCTCTGAGGAAGCAAGAGTTATTACCACATTCCGATAAAATGAAGGTTACGTTCACGGGTCTGGCCGGTTTTGTGGCCGTCTTCGGGGTCCTCAGCTTTATTGGACTCGTTCTGGCAATTGGAACTGATTTTTGGTACATCATTGACACTTCTAAGAGGGAAAACAGCTCGTCTGTATCCCTCAGCTCCCATTCTGGACTCTGGAGGACTTGTAACTTTCATAACCAGTGCTGGCCATTTATGAATCCTTTTGGAGCAGGAAGAAACTTGTCAGATTCACAAAGACAGATACTAAACATGCAGGGAACGTTCATCATCCTGCTGCCGCTCAGCGTGATCCTGCTGTTTGTTGGAGGAATGCTGGGCTTCATCAGTTTGCTGGCACGAGCGTATGTACTGCTGCTGCTGACCGGGGTGCTGCTTCTTTTCGGTGCTGTGCTCTCATTGGCTGGCATCTGTGTCTACATGGCGTATTCTGCTGCTGCCTTCAGAGAGGCCGTGGACATATCTGGACACAAGACCCTGCAGGACATCGAGATTTACTTTGGCTGGTCTCTGATTCTAGCCTCTGTGTCTTTTGTTGGAGAACTGTGTACTGCTGTGGCTTTCCTGCTGACCTCAGTCAAAGTGAGCCAGCAGACCAATCAGGAGCAAGACGAATAACAGCTATCCCACATGAACTCAATCAGGACTGTGCTGAGGACGGCACCATGTGAGGGCATTGAAAAATGACATACAgtacaaacactgaaaataaagttgatgtttacatgtatattttttatcttttaaaggAAAATGGAAATGTCAGCacaaatttatttcaatgttcTCCATTGAAGGATTAATTCAGCCCAAAATGAAATTggctgtttatttattcaatcttttttttatagGGTATCCAAAAAGGTGATGCAGCATCAGCTCACATACAGTATATTGTAAAAGTCATAGGTAATCATTTTGACTGTCAAAGTGCCATTAATGTTTCATCACCatcacaatttcaaaaaataataataatgaactataataataaataaacattttataatattctactgaagaaaaatatatactacatcttggatggccttGGTTAGGTTTACTGTAAACCGTATGACCTTTAAGGGCAAATTACAGATTTAATGTTTGTGAATTACATAACGTTtgtgtcaagaaaaaaaaaactatgttaaatgaattgttaaaaaattataataataatccatGTCCAAAATTATGAAATATCAGAGTGACGCTAAAAATATCCCATTGAATAATGATtttataacggtggtttgttatgtagacaatcagatatatatataggatatatgggatatatatatatatatatatatgctgctgCCTTCAGAGAGGCTGTGGACATTTCTGGACACAAGACCCTGCAGGACATCGAGATTTACTTTGGCTGGTCTCTGATTCTAGCCTCTGTGTCTTTTGTTGGAGAACTGTGTACTGCAGTGGCTTTCCTGCTGACCTCAGTCAAAGTGAGCCAGCAGACCAATCATAATGTTATAtatc

Function

symbol description
tmem114 Predicted to be located in apicolateral plasma membrane. Predicted to be integral component of membrane. Predicted to be active in apical plasma membrane.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000038089

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00050107 True 1945 mRNA 0.38 4 27929505 27952302

Neighbor

gene id symbol gene type direction distance location
XLOC_025399 carhsp1 coding upstream 97690 27798094 ~ 27831815 (+)
XLOC_025398 nat15 coding upstream 133154 27786601 ~ 27796351 (+)
XLOC_025397 eci1 coding upstream 151834 27770110 ~ 27777671 (+)
XLOC_025396 arhgdig coding upstream 160273 27713610 ~ 27769232 (+)
XLOC_025395 clcn7 coding upstream 220193 27664864 ~ 27709312 (+)
XLOC_025401 sept12 coding downstream 550117 28502419 ~ 28627447 (+)
XLOC_025402 NA coding downstream 697645 28649947 ~ 28733765 (+)
XLOC_025403 NA coding downstream 813391 28765693 ~ 28783757 (+)
XLOC_025404 flr coding downstream 879148 28831450 ~ 28853935 (+)
XLOC_025405 alg1 coding downstream 907981 28860283 ~ 28869640 (+)
XLOC_025429 BX649540.1 misc downstream 2296437 30248739 ~ 30249036 (+)
XLOC_025393 NA non-coding upstream 328032 27594373 ~ 27601473 (+)
XLOC_025391 NA non-coding upstream 434700 27346839 ~ 27494805 (+)
XLOC_025392 BX000529.1 non-coding upstream 522294 27407096 ~ 27407211 (+)
XLOC_025390 NA non-coding upstream 585816 27294308 ~ 27343689 (+)
XLOC_025384 NA non-coding upstream 1293107 26635820 ~ 26636398 (+)
XLOC_025406 NA non-coding downstream 946827 28899129 ~ 28926075 (+)
XLOC_025410 BX005369.1 non-coding downstream 1214718 29167020 ~ 29167147 (+)
XLOC_025411 NA non-coding downstream 1441163 29393465 ~ 29398151 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000069_01099046_01114142 TMEM114 coding CI01000069 null 1099046 ~ 1114404 (+)