XLOC_025413 (grap2a)


Basic Information

Item Value
gene id XLOC_025413
gene name grap2a
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 29445473 ~ 29468859 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00050133
TATACACGGGCACGCGCATGCAGGTAGCGGTAGAAGAATTGAGGGTGAGACACCAAGGAGGTGGCAGTTTATCTGCTGGAGGTTTCTTATCTTTGTTGCTAAACAGCGACACAGCGGTAACAGGTGTTGCTGTGATGGCCTCTTGAAACCAGTTACACAAGTGTCTTGACATCCTCCGATCACAAGCAGTGTTTTATAACCCTGTCCTCTGCTCTGCCTCTCAGTTTTTCACAATGGAGGCTAGAGGAAAGTATGACTTCAGTGGCACGGCAGAAGACGAGCTCAGCTTCAGGAAAGGAGACACTCTGAAGATTCTGGGGTCTCAGGACGATTGGTTCAAAGCAGAGTTACATGGCCATGAGGGTTATGTGCCGAAAAACTATGTTGACAGGCAGATACCGAGCTGGTTTAAAGAGAGCGCCAGTCGCGGATCAGCTGAGGAGACGCTCATGTCTCGAGAGGTGGGCGCTTTCCTGATTCGAGGCAGCCAGAGTTCACCTGGAGATTTCTCCATCTCTGTCAGACACGATTATGATGTGCAACATTTCAAAGTTATGAAGGACAAATCGGGCCACTATTATTTGTGGACAGAGAAGTTTACCTCTCTAAACAAGCTTGTGGACTTCTACAAGACCACCTCTATATCCAAGCAGAAGGAGATCTTTCTTAGGGATGGAAGTGGAGATGAGCCAAGGGCACCCCCGCCTATAAAGAGTCAGCCAGAAGTTCGGCCTCCCCCAGGTGGTGGCTATGGCAGTCCACAAACCTCATCACAAAACCGCAGCACAACAGATCCAACTCACAACCAAAAGGGTAAGAGAGGAAGTGTTGAGGAGAAATCTAACACTCTGGGTCACCAAGGGAAGAACAGCCCGGCCCCTCGACGAACCTCTGAAACTGCCCCTGCTCCGagatcAACCATACAGGTGAGAGCAATATATGACTTCACAGCAGAGGAAGACGATGAATTGGGTTTCAATAGCGGTGACATCATTGAAGTACTGGACCGTTCGGATGCGTCATGGTGGAAAGGTCGATTGCGGGGCAGGAGTGGTCTTTTCCCTGCCAATTACACAGAACAGATCTAATACTCAAAGGTGTGGAATCACCATACCAAGAGTCAAATACATGTACAATGTATGGACTGGTCcattaaattcaaatgaatttcATATAGACTGCTGCAGAACTGTTGAAGACAACTGAGAAAAAGATATTTCTCATCAAAGTCTTTCGTGCTTCTCTTTTTCATATATATAaccgtttttttattttagaaataaggTACGAAGAAAGGACTATACCATTCCATTCCTTTTAGTCAAACTCTCCCAGATACAGATTATTGaattatacagtacatttataCACAATGACCCCAGTTTACAAGTAGTGGAAAAGTTGGCCAGAACATTCCCAAAACATTCTTTGTTGGTTTGGTTTTGCAACCTACATAGAAAATGTTATTATGGCCTAGTGAGTACATTTGGCCAGTGTTCGGTGTTTGCTGGGACACTTGTCATCACCTTGATCATTTATAAAAGCgttttattttaggttttcaAAAGGACACACTAACACAGGAGTTCTTACAGTTAGCAAGGTTTTGTTACCGTTTTGTATTGAATTATATGTTTTACCAGTTCGAACAATTTGTCAAAACAGGCCTATTACAAAGCATGTTGTTTTGTTGTACAGGATGGAAAAGATGTCAGACTCAAACATGATAACAGCAGTGTTATACAGAACTTGAATAAAAGTGCTTTCAAAAa
>TCONS_00050134
TACTATTGACATCATGGTTTGTCTAACATGCAGCCTCTCTCAATCTCTTATTTGCAGACCCTGTCCTCTGCTCTGCCTCTCAGTTTTTCACAATGGAGGCTAGAGGAAAGTATGACTTCAGTGGCACGGCAGAAGACGAGCTCAGCTTCAGGAAAGGAGACACTCTGAAGATTCTGGGGTCTCAGGACGATTGGTTCAAAGCAGAGTTACATGGCCATGAGGGTTATGTGCCGAAAAACTATGTTGACAGGCAGATACCGAGCTGGTTTAAAGAGAGCGCCAGTCGCGGATCAGCTGAGGAGACGCTCATGTCTCGAGAGGTGGGCGCTTTCCTGATTCGAGGCAGCCAGAGTTCACCTGGAGATTTCTCCATCTCTGTCAGACACGATTATGATGTGCAACATTTCAAAGTTATGAAGGACAAATCGGGCCACTATTATTTGTGGACAGAGAAGTTTACCTCTCTAAACAAGCTTGTGGACTTCTACAAGACCACCTCTATATCCAAGCAGAAGGAGATCTTTCTTAGGGATGGAAGTGGAGATGAGCCAAGGGCACCCCCGCCTATAAAGAGTCAGCCAGAAGTTCGGCCTCCCCCAGGTGGTGGCTATGGCAGTCCACAAACCTCATCACAAAACCGCAGCACAACAGATCCAACTCACAACCAAAAGGGTAAGAGAGGAAGTGTTGAGGAGAAATCTAACACTCTGGGTCACCAAGGGAAGAACAGCCCGGCCCCTCGACGAACCTCTGAAACTGCCCCTGCTCCGagatcAACCATACAGGTGAGAGCAATATATGAC

Function

symbol description
grap2a Human ortholog(s) of this gene implicated in hepatitis C. Orthologous to human GRAP2 (GRB2 related adaptor protein 2).

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-050417-275 Human ortholog(s) of this gene implicated in hepatitis C. Orthologous to human GRAP2 (GRB2 related adaptor protein 2).

Ensembl:

ensembl_id ENSDARG00000006468

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00050133 False 1772 mRNA 0.44 9 29445473 29468859
TCONS_00050134 True 803 mRNA 0.49 7 29458517 29468031

Neighbor

gene id symbol gene type direction distance location
XLOC_025412 BX649558.1 coding upstream 35514 29406013 ~ 29409959 (+)
XLOC_025411 NA coding upstream 47322 29393465 ~ 29398151 (+)
XLOC_025409 cacna1ia coding upstream 67043 29082267 ~ 29378430 (+)
XLOC_025410 BX005369.1 coding upstream 278326 29167020 ~ 29167147 (+)
XLOC_025408 lgals2a coding upstream 483955 28953274 ~ 28961518 (+)
XLOC_025414 fam83fa coding downstream 424 29469283 ~ 29486498 (+)
XLOC_025415 rac2 coding downstream 41959 29510818 ~ 29544039 (+)
XLOC_025416 sstr3 coding downstream 132058 29600917 ~ 29602479 (+)
XLOC_025417 NA coding downstream 171125 29639984 ~ 29640294 (+)
XLOC_025418 eif3d coding downstream 171978 29640837 ~ 29654925 (+)
XLOC_025429 BX649540.1 misc downstream 779880 30248739 ~ 30249036 (+)
XLOC_025406 NA non-coding upstream 519398 28899129 ~ 28926075 (+)
XLOC_025403 NA non-coding upstream 661716 28765693 ~ 28783757 (+)
XLOC_025419 CT573429.1 non-coding downstream 195498 29664357 ~ 29671653 (+)
XLOC_025420 NA non-coding downstream 218690 29687549 ~ 29710222 (+)
XLOC_025423 NA non-coding downstream 445585 29914444 ~ 29915357 (+)
XLOC_025424 BX901883.3 non-coding downstream 460723 29929582 ~ 29929887 (+)

Expression


Co-expression Network