G632858


Basic Information

Item Value
gene id G632858
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 62343497 ~ 62343731 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU719415
atgaaatacagaaatatctcatttacacaagtattcacacctctgagtcaatactttgtagaagcactcgttgaatttgcaatttccagcttgttgtttaatgtttatgtccaatggccgatgagcactgatGTTTTATCTAtcattgaaaaggatttgccagtagatagtcgacttgattcatgatgatgactgcttgtctagctaagattttgaaaaaGAGACcgtgtttgta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU719415 True 235 lncRNA 0.35 1 62343497 62343731

Neighbor

gene id symbol gene type direction distance location
LOC110528175 LOC105017014 coding upstream 1478 62325429 ~ 62342019 (+)
LOC110528174 LOC106583173 coding upstream 24386 62241985 ~ 62319111 (+)
LOC110528172 LOC106583174 coding upstream 105014 62231721 ~ 62238483 (+)
LOC110528171 LOC106583176 coding upstream 115479 62194655 ~ 62228018 (+)
LOC110528168 LOC106583178 coding upstream 207912 62024859 ~ 62135585 (+)
LOC110528177 LOC106583170 coding downstream 23210 62366941 ~ 62482607 (+)
LOC110528183 NA coding downstream 497184 62840915 ~ 62843329 (+)
LOC110528184 NA coding downstream 516818 62860549 ~ 62864970 (+)
LOC110528186 LOC106583163 coding downstream 532293 62876024 ~ 62878348 (+)
LOC118965310 NA coding downstream 535404 62879135 ~ 62881941 (+)
G632810 NA non-coding upstream 19412 62321144 ~ 62324085 (+)
G632824 NA non-coding upstream 87251 62253695 ~ 62256246 (+)
G632823 NA non-coding upstream 87847 62253089 ~ 62255650 (+)
G632780 NA non-coding upstream 124751 62218495 ~ 62218746 (+)
G633264 NA non-coding downstream 153751 62497482 ~ 62497894 (+)
G633272 NA non-coding downstream 158742 62502473 ~ 62502708 (+)
G633296 NA non-coding downstream 186229 62529960 ~ 62596889 (+)
G633275 NA non-coding downstream 189491 62533222 ~ 62539491 (+)
G633312 NA non-coding downstream 211323 62555054 ~ 62566367 (+)
G632817 NA other upstream 14436 62245920 ~ 62329061 (+)
G632809 LOC100194703 other upstream 112148 62230515 ~ 62231349 (+)
G632776 NA other upstream 203506 62139516 ~ 62139991 (+)
G632146 NA other upstream 651850 61691281 ~ 61691647 (+)
G633613 NA other downstream 585667 62929398 ~ 62929699 (+)
LOC110528206 hoxc6 other downstream 1276622 63619980 ~ 63622602 (+)
LOC110528222 LOC106583247 other downstream 1852310 64099788 ~ 64201232 (+)
G635332 LOC100380681 other downstream 1974469 64318200 ~ 64326259 (+)
G635635 NA other downstream 2441485 64785216 ~ 64786393 (+)

Expression


Co-expression Network