G633296


Basic Information

Item Value
gene id G633296
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 62529960 ~ 62596889 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU719929
ctgaaaaattgggcgtgcaaaattattcagcccctttactttcagtgcagcaaactctctccagaagttcagtgaggatctctgaatgatccaatgttgacctaaatgactaatgatgataaatacaatccacctgtgtgtaatcaagtctccgtataaacctgcactgtgatagtctcagaggtccgttaaaagcgcagagagcatcatgaagaacaaggaacacaccaggcaggtccgagatactgttgtgaagaagtgtaaagcctgatttggatacaaaaagatttcccaagctttaaacatcccaagaagcactgtgcaagcgataatattgaaatggaaggagtatcagaccactgcaaatctaccaagacctggccgtccctctaaactttcagctcatacaaggagaagactgatcagagatgcagccaagaggcccatgatcactctggatgaactgcagagatctacagctgaggtgggagactctgtccataggacaacaatcagtcgtatat

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU719929 True 524 lncRNA 0.44 2 62529960 62596889

Neighbor

gene id symbol gene type direction distance location
LOC110528177 LOC106583170 coding upstream 47353 62366941 ~ 62482607 (+)
LOC110528175 LOC105017014 coding upstream 187941 62325429 ~ 62342019 (+)
LOC110528174 LOC106583173 coding upstream 210849 62241985 ~ 62319111 (+)
LOC110528172 LOC106583174 coding upstream 291477 62231721 ~ 62238483 (+)
LOC110528171 LOC106583176 coding upstream 301942 62194655 ~ 62228018 (+)
LOC110528183 NA coding downstream 244026 62840915 ~ 62843329 (+)
LOC110528184 NA coding downstream 263660 62860549 ~ 62864970 (+)
LOC110528186 LOC106583163 coding downstream 279135 62876024 ~ 62878348 (+)
LOC118965310 NA coding downstream 282246 62879135 ~ 62881941 (+)
LOC118965311 NA coding downstream 391592 62988481 ~ 63012558 (+)
G633272 NA non-coding upstream 27252 62502473 ~ 62502708 (+)
G633264 NA non-coding upstream 32066 62497482 ~ 62497894 (+)
G632858 NA non-coding upstream 186229 62343497 ~ 62343731 (+)
G632810 NA non-coding upstream 205875 62321144 ~ 62324085 (+)
G632824 NA non-coding upstream 273714 62253695 ~ 62256246 (+)
G633419 NA non-coding downstream 8210 62605099 ~ 62605395 (+)
G633424 NA non-coding downstream 10276 62607165 ~ 62607679 (+)
G633426 NA non-coding downstream 11282 62608171 ~ 62608381 (+)
G633431 NA non-coding downstream 24873 62621762 ~ 62622445 (+)
G633443 NA non-coding downstream 35862 62632751 ~ 62633041 (+)
G632817 NA other upstream 200899 62245920 ~ 62329061 (+)
G632809 LOC100194703 other upstream 298611 62230515 ~ 62231349 (+)
G632776 NA other upstream 389969 62139516 ~ 62139991 (+)
G632146 NA other upstream 838313 61691281 ~ 61691647 (+)
G633613 NA other downstream 332509 62929398 ~ 62929699 (+)
LOC110528206 hoxc6 other downstream 1023464 63619980 ~ 63622602 (+)
LOC110528222 LOC106583247 other downstream 1599152 64099788 ~ 64201232 (+)
G635332 LOC100380681 other downstream 1721311 64318200 ~ 64326259 (+)
G635635 NA other downstream 2188327 64785216 ~ 64786393 (+)

Expression


Co-expression Network