G636968


Basic Information

Item Value
gene id G636968
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 65864512 ~ 65868067 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU724053
agggacacactccaaaactcagacatcatttacaaaaacAGTATTTGTGCTTAGTGAGGCAGTAGCAATGACAATGCATTATATTGATAGGTGTGTGAATTGGGCCATAATTGCTGTACTGCctgagcattcgaaatgtaatgagtacttttgggtcaAGGAAATTGTATGGGAGTAAAAAGCACATATTTTCTTTAgtaatgtagtggagtaaaagtaaaatttgtcaaaaatataaattataaagtacagatacccctaaAAAAAACTACaaggaaaattccacccaaaaacaatattttggtatttctttcattagtccattgtttaTATAGtcgcaaaatgttttgcatgtcagcaatcaggttatcaagatatataactttcaaaatacagaaatacaaccAGTATGATGATTTTTGCATCACATGACACTACGGTTTGCATGATATGATAAATGCATCATACCAGCTATATTTCTGTACTTTGAAAGtgatatatcttgaaaacttgcttgctgacatgcaaaacatttgggACTATATCAAACAAGgtactaatgaaacaaataccaaaagggTGGCATTTTCCTTTAGGAAGTACTTCAAATGATTTTTACTTAGTTACTGTACACAACGGAGGATAAGACTCATTAGTAAGCTCATTAGGCATTTcaaattatattcttcaagaatcagtgGTTTTGAATCATTAATCATTCAACAGATTGATCATCTGTGATTTAGTtcttgttgttgtagtagtttcTTCACCAAAACAGGACAGGTTCTTCTCACTTGATTCTTTGTCACATAACTCCCCCTCGTGGCCAACACCTGACACTGTTTCCTTCTTAGGAAACCCGGAAGGGCAAACGCTCACTCtgaatgaatgacattGCTGAAACATACTTTTGCACCCCATCAAAGGCATTTGAAAATTCACATGTTTATtttggatacattttttttatacaagTATTCACTTAACCCTGGACACCAGTAGTTTACAAAACACAAAAGGATACACTATTTGATTTCTAGCTATCTCTAACAAAGATCTATCACCAATTTCCCTAAAATCCACATATATTTCACACATTTTGATGCCTCATGCAGTTTTGGTGTTTCTTGAGGAAACAATCAAAAACACTACAACTTTTTACTTTATAACATGATAAAACATGGTAACAAAAGTGTGAACCTGCCATATTAATACAATCAAGAGTTGTGTAAAGAACTGTATCCTATATGACCGCATATATAATTGTTGACAATTTTCTGACCAGGGCTGTCTGTTCAGTTtgtataaataaaaatataatccTACGTTCTATTTATAAGTGTCTGTCAAATCACTGAAGGACACCAAAAATAAAGGATAAATGATGTACAGAAATGTTTTAGTTGCAATACCTGTCTGTTACTGCTTTAGATTATTCTGAATCCGATTTGACTGTAAACGTAAGAGTCCTTCCTCTGATCAACTTGTTTGTGAAGTATGTTATTGGACCTGCATGTTTAGAAGCACTATAAATAAAGTTGAATTTGAATGCAAGTACATTCAGGTGACATGCTACAGTAGGTCTCTCTGGGAGGGGGTGTGGTGAAAGTTCAGTGCCTAGTGAAAATCTATACACCCCTTGCACAGTTGTCACATTTTCTGCCGCCAAATTAAATATTTCAAAAAGAGATtacatatagtttttatttccTACTGATATATACAACAAGCTCCagattttcaaagtgaaagaaagtATAGAACTGTTTTTATTAAATTAAAAATGAAGATGTCTTCAGACCCCATAGTTAATACtaggtggaagcacctttggcagcaattacagctgtaaatcatttagaataagattctaccaactatgcacaactcttagggcaacacatatccattgtttttgtcaaaattgctcaagctcagtacATTTGGTAGGGAATCATTGATGGACTGCAATATTCAAACATTGTctctgattttcaagcagatttaagtcaagaCTGAGACTGGACCATTCAGAAACACTCAACACCACTTTgtcaggactgagactggaccATTCAGAAACACTCAACACCACTTTgtcaggactgagactggaccATTCAGAAACACTCAACACCACTTTgtcaggactgagactggaccATTCAGAAACACTCAACACCACTTTgtcaggactgagactggaccATTCAGAAACACTCAACACCACTTTgtcaggactgagactggaccATTCAGAAACACTCAACACCACTTTgtcaggactgagactggaccATTCAGAAACACTCAACACCACTTTgtcaggactgagactggaccATTCAGAAACACTCAACACCACTTTgtcaggactgagactggaccATTCAGAAACACTCAACACCACTTtgaaagccattctggtgtgtctttggcattaATATTGGTGTAATTGTCTTGCTGTAAAATAAACTCTATCAGACAGTCATAACACCAGGGTATTCAGAAAACTGAGGCAGGTTTTTCTCTAACTTTTTACCTTGAATTTGCttgtttcatatttattttgatcctgacaaactcaCCAGTCCCTGCCGGGGACAAGCAAgtggtgtgtagactttcactaggcactgtatGTGAGTGAGCTGGCATGTGTGTttgacagtgagtgtgtgtgtgagtaggtttgtgtgtgtcttcccccttcctctcttATTAATACATCTAGAGTGGCGGGTGGGCACAGCAGGtaacgacagagagagaaatagagagagggagagagaaggagggagcgagggagattgtttctatgtctgtctgcctatctgcctgtcagtctgcctgtctgtctgcctatctgcctgtcagtctgcctatctgcctgtctgtctgcctatctgtctgtcagtctgcctatctgcctgtctgtctgcctatctgcctgtctgtctgccgatctgcctgtcagtctgcctatctgcctgtctgtctgcctatctgcctgtctgtctgcctatctgcctgtcagtctgcctgtctgtatgtatgtgggCATTGTCTGGTCCTTCATGAGTATGACAGTACATTAACTATCCTTTTACACACTAACATAAATCACTTGGTTAGCTGAGACACATTTTTTTGGTGGGAGAAAGACAAAGCACTATATGGCAGAATGTTGCCATACTACTGCCAGTAGTCTATATGGCCCTAATGTGGATCTGTCCTGCTGTTCTTAAACTTTTCCATGCTAGCCCATACAGCTATGCCATGATAATAGAGTTTGTTTAACTTACAGTACTCAACACTTGGGTGAGAGTCTGTTTGTGTGAGTAAACGCTTtggcacagcacacacacaaacatacacacacgcacacacacaggcacataacACACTCAACGCCTGCCCCCGTTATAAGAGTAGTCTGCCTTGTTGTGCATGACCAGTCTGTTGTCTACGAAGTAGAAGCTGTCTGACTTCGTCTCGTAGGGATGCTCCACCATCTGATGAA

Function

NR:

description
uncharacterized protein LOC110497064

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU724053 True 3526 lncRNA 0.39 2 65864512 65868067

Neighbor

gene id symbol gene type direction distance location
LOC110528275 NA coding upstream 109461 65744766 ~ 65755822 (+)
LOC110528274 gem coding upstream 163924 65687873 ~ 65700588 (+)
c7h20orf96 cssa22h20orf96 coding upstream 179050 65677046 ~ 65685462 (+)
LOC110529001 NA coding upstream 249515 65614552 ~ 65614997 (+)
maf1a LOC106583327 coding upstream 397708 65459431 ~ 65466804 (+)
LOC110528279 LOC106583318 coding downstream 3667 65871734 ~ 65899387 (+)
LOC110528281 LOC106565490 coding downstream 33838 65901905 ~ 65908098 (+)
LOC110528284 LOC106583317 coding downstream 41115 65909182 ~ 65929285 (+)
plpp5 ppc1b coding downstream 106991 65975058 ~ 65983010 (+)
ddhd2 LOC106583313 coding downstream 115476 65983543 ~ 65991860 (+)
G636946 NA non-coding upstream 50602 65811466 ~ 65813910 (+)
G636922 NA non-coding upstream 83314 65780538 ~ 65781198 (+)
G636919 NA non-coding upstream 88540 65775760 ~ 65775972 (+)
G636904 NA non-coding upstream 104957 65759286 ~ 65759555 (+)
G636903 NA non-coding upstream 106121 65758157 ~ 65758391 (+)
G637018 NA non-coding downstream 42293 65910360 ~ 65918140 (+)
G637020 NA non-coding downstream 46343 65914410 ~ 65922263 (+)
G637025 tctn1 non-coding downstream 66935 65935002 ~ 65935583 (+)
G636973 NA non-coding downstream 74152 65942219 ~ 65977095 (+)
G637052 NA non-coding downstream 130526 65998593 ~ 66000866 (+)
G635848 NA other upstream 534220 65329936 ~ 65330292 (+)
G635769 NA other upstream 812356 65051644 ~ 65052156 (+)
G635635 NA other upstream 1078119 64785216 ~ 64786393 (+)
G635332 LOC100380681 other upstream 1538253 64318200 ~ 64326259 (+)
LOC110528222 LOC106583247 other upstream 1663280 64099788 ~ 64201232 (+)
G637929 NA other downstream 684521 66552588 ~ 66607744 (+)
G638011 NA other downstream 753619 66621686 ~ 66622094 (+)
patz1 LOC106583552 other downstream 1572465 67433792 ~ 67446077 (+)
G639648 NA other downstream 2345451 68213518 ~ 68214402 (+)

Expression


Co-expression Network