G637158


Basic Information

Item Value
gene id G637158
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 66223629 ~ 66225563 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU724256
TCTACAGGGAAAGCTAGTAAATCCTTTGTAAGACATCAACATCATCATATCGAGAACAGGGCGACATGTTTATCGTCTAAACAATATCCGCAAAATGTCCGCAAAATGCACATTGGTATTCTGCCGCTCGCAAAGTTTCCAAAAAGTGGAAAAGTAGAGGGATGGACTTAGGTAGCAGATGTTAAATTGATAGGCACGTATGAAATGAAGTCAATTTACAACCTTGTACACTCCCGCCCAGATGCTGAGTAAAAGATGCACATAGAGGATGTGAGCAAAATGTTTATTTCACATGAAGGCTAACCTGTTCTACAAGAATTTGCTACGTGACCTTTCACTGCTACACTGAATTTTGGTCGTCATGGTTGAATATAAatcatttgtttgtgtgtgtgtggggggggggggggctgatgtTAAGCAAATATAAAGAATAAGTACATCAAAAGTAAGTTGATATATTAAAGTATAAAGAGTAGGCTTATGTGACTGAAAATACCATATGTTTTTGCTGCATGAGGTGTTCAGCAGTAGGAAAATGTCACCCATAAAATGTCAATTTAACGCAAACTAAaacatgtataaatatatattttttctatcgCTCACATGCTCCAGTGTTGAATCGCCGTCATTGTTCACTGAAATGAATATGATGCTGAAGAGCATAGGATATTTCTTTTTCATTCACTCTTGTATATACCCCCCAAACTGTTGTTTATGATTGATtgatgaagatttttttttttagttctACTGATTTGTCAACGGCATTGATGTACTTaaatgaaaatgaaaaagaaATATCCTATGCTCTTCAGCATCATATTCATTTCAGTGAACAGTGACGGCGGTAAAAAATGAATATTGAAGTAGTATGTTGTAAGCTTAATGATCTCTCAAGCCGCATGGTTGCTTTTGCGTGTAGAAGTGCATTACACAAGATGGGTCCAAGGCAAAATGCTCACTTGATAAAGGACGTTTTAAAACAATAATATTCATTTGACATTTAAGAAGACACATACATGTAACAATCACTTTTCGCTTTAACAAAAATAGATGTGGCTTTTCCAGCCTTGAGGTACCCTTTCAGTATCTATAAAAAGCATGGCTCTGTCTGaaatggtaccctactccctatatagagtactacttttgaccagatccctgttggtcctggtcaaagtagtgcagtgtatagggagtagggtgccattttggaagaAACCTAAGTCTGCCTATTTACAGTGTCAATTAGCATTATGGTTATTTATAAAGGTCCTGTTGCAAGAGTCAGTTGGTGCTGGGGATTGTGGGTAGTGCGGTTTTAGTGTGTTTTAGTGTAGTCATCTAGCTCAGGGATGGACTAATCCTAGaaggctgcagTTCCACTTGATCTAAATCGAAGACtttgattagttgattatttgaatgagGCGTATTAGTGCTGAGCtgtaacaaaagcctgcacacagtGTGTCCCTTTAGGACTGGAGATGCCCACCACTGATCTAGCTGATATgcacaggggagagagaaaatcCAGGAGAACGTTTAGTTGTGTTTCTAAACTCTGAGATTTATCTGTACATTTCCAGGATTTAATTGAGCAGATATTCCAAGCGTTTATCTCAGTGTTTGTGACAAATGTTGTTTAAGGTGTTTTGGTCCTTGCAGACGTCAAATGTTGGATATAAAAAATGATTTGTTACTGTATATCGACATTGCATTAACCATTATTTATTCTAGTAAAATCCCATAGTTCTGACATTCAACATTGACAGTGGGTCTTCAACGCTTTAGCTGCTTTTCCTATTGGACTCTCTGGGTGATGTAATACTCTGACCAAACTCCTATTCCCTAACCCGGGTAAGGGGGAtgtcactcttc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU724256 True 1890 lncRNA 0.38 2 66223629 66225563

Neighbor

gene id symbol gene type direction distance location
LOC110528296 ccdc63 coding upstream 9996 66204437 ~ 66213633 (+)
LOC110528290 LOC106583572 coding upstream 109071 66049287 ~ 66114558 (+)
tacc1 LOC106586881 coding upstream 184669 66002466 ~ 66038960 (+)
ddhd2 LOC106583313 coding upstream 231769 65983543 ~ 65991860 (+)
plpp5 ppc1b coding upstream 240619 65975058 ~ 65983010 (+)
myorg kiaa1161 coding downstream 85448 66311011 ~ 66319207 (+)
LOC110529005 LOC106583566 coding downstream 705475 66931038 ~ 67049072 (+)
LOC110528302 LOC106583563 coding downstream 876539 67102102 ~ 67112227 (+)
LOC110528303 LOC106583562 coding downstream 896628 67122191 ~ 67130475 (+)
LOC110528306 LOC106583560 coding downstream 962313 67187876 ~ 67201857 (+)
G637153 LOC106581772 non-coding upstream 5984 66217397 ~ 66217645 (+)
G637147 NA non-coding upstream 20312 66203111 ~ 66203317 (+)
G637128 NA non-coding upstream 50077 66172845 ~ 66173552 (+)
G637127 NA non-coding upstream 52022 66171328 ~ 66171607 (+)
G637208 NA non-coding downstream 53827 66279390 ~ 66280057 (+)
G637246 NA non-coding downstream 113078 66338641 ~ 66401340 (+)
G637299 NA non-coding downstream 194941 66420504 ~ 66432090 (+)
G637901 NA non-coding downstream 302840 66528403 ~ 66528606 (+)
G637928 NA non-coding downstream 326774 66552337 ~ 66554843 (+)
LOC110528281 LOC106565490 other upstream 315810 65901905 ~ 65908098 (+)
G635848 NA other upstream 893337 65329936 ~ 65330292 (+)
G635769 NA other upstream 1171473 65051644 ~ 65052156 (+)
G635635 NA other upstream 1437236 64785216 ~ 64786393 (+)
G635332 LOC100380681 other upstream 1897370 64318200 ~ 64326259 (+)
G637929 NA other downstream 327025 66552588 ~ 66607744 (+)
G638011 NA other downstream 396123 66621686 ~ 66622094 (+)
patz1 LOC106583552 other downstream 1214969 67433792 ~ 67446077 (+)
G639648 NA other downstream 1987955 68213518 ~ 68214402 (+)
LOC110528344 LOC106583528 other downstream 2528500 68568757 ~ 68790841 (+)

Expression


Co-expression Network