XLOC_025724



Basic Information


Item Value
gene id XLOC_025724
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 50808637 ~ 50809193 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00052795
gcaaacagaGGAAACATTTGATGTGTGGTAGGCGGACCCTTTAGGTGCGTGCGTTGCGTGCCAATCACGTCAAGGCTTTATATGAGCAGGTGCGCGCTCCGTCTCGGGTTGGCATTTTGTTGTTTGGACCGGTTGATGGGAGTCTCTCCACTAGCCCTCCAGTGAGTAGAGCATGTTAGAAACCGTGAGTAAGATGGAATGGATTATTAAGTTTACAtgagtgtatttttcttttaaggATAGTGGTGGCAGTCTGAAATTAACCTGATTATGTGCGGCCAATTTATGGGCGTAATGTAGAGTTTATTCCAAAGGTAAGTTTTGTGTGTTAGAGTAaacgtagaaaaaaaaaaagggaaaagagtTTTAAggaatgttgttgttttgcagAGTCTGCTAGCTGCTGCTTTGCTGTAATTTAAGTGGCATCTGGCCCTATTCTGAACGGCATTCCTACGCGTGCGTGTGTGGACATCAGACGCAAGCGCTTCGGACTCCATCCTCCTTGGCCAATTCATGTGCGCTGCCTCATTCATGCGCGCTCGCTGTATGATTTA

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00052795 True 557 lncRNA 0.46 1 50808637 50809193

Neighbor


gene id symbol gene type direction distance location
XLOC_025723 NA coding upstream 12420 50795321 ~ 50796217 (+)
XLOC_025722 gsg1l2a coding upstream 27132 50602866 ~ 50781505 (+)
XLOC_025721 BX649397.1 coding upstream 255889 50537127 ~ 50552748 (+)
XLOC_025720 gas7a coding upstream 388416 50310684 ~ 50420221 (+)
XLOC_025719 NA coding upstream 520149 50286780 ~ 50288488 (+)
XLOC_025725 NA coding downstream 202096 51011289 ~ 51023057 (+)
XLOC_025726 NA coding downstream 608229 51417422 ~ 51446996 (+)
XLOC_025727 ttyh2l coding downstream 754502 51563695 ~ 51657722 (+)
XLOC_025728 chmp6a coding downstream 850965 51660158 ~ 51677582 (+)
XLOC_025729 baiap2a coding downstream 875770 51684963 ~ 51948026 (+)
XLOC_025429 BX649540.1 misc upstream 20559601 30248739 ~ 30249036 (+)
XLOC_025716 NA non-coding upstream 1047941 49753768 ~ 49760696 (+)
XLOC_025715 NA non-coding upstream 1183959 49565257 ~ 49624678 (+)
XLOC_025730 NA non-coding downstream 949152 51758345 ~ 51758711 (+)
XLOC_025731 NA non-coding downstream 1086131 51895324 ~ 51900899 (+)
XLOC_025735 NA non-coding downstream 1414910 52224103 ~ 52264146 (+)

Expression



Co-expression Network