LOC110529714 (LOC106571503)


Basic Information

Item Value
gene id LOC110529714
gene name LOC106571503
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 26599030 ~ 26602934 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021612175.2
GCAAGACTGGCTGCCCTGCAACCACACACCTCACCTTTAAAGGTTACCTGGCCCAGTAAGAACCAACGACGTCACGCGTCCCGTCCTCAGGACAGGTCGCGCGTCACCTTGACAAGGGTTGTATCATGGAATGAGGAAAAGAAGATCACACCATCTGGACAGAATACTTTAAGATATTAACTCTCATCGATAACAACTATCAGTAATGTGAAAATTAGACATAATAAATTGACAGTCACAGAATTTGAAAGAAACAGTTGTAAGTCAGGTCCAGTTTCAGAATGTACCGCCAGTGCGCGAGTCTGGTGGAACGACACCGGTCAGAGCTGAGTTTCGCATTGCTGTTGTCAGGCTATGCGCTCTACCTGATTCTTGGCGCATGGGTCTTCTCCGCGGTTGAGCTTCCATATGAGCAACGGCTGCGCGAACAGCTGGAGACCGCCCGGCAAAAGTTTCTCTGGGACAACGCGTGCGTGTCTGACGAAAGGCTCGAGGAGCTTCTGACCCGCGCACTGCATGCCAATAACTACGGCGTATCGGTGCTCGGTAACGCTAGCGAAAACAACTGGGACTtcatctcctctctgttctttacCAGCACAGTTCTAACCACCACGGGCTATGGTCACACTGTACCACTGTCAGATGGAGGAAAGGCATTCTGTGTGTTCTACTCTCTCCTCGGAATCCCCgtcactctcctcttcctctccgccCTGGTACAAAGAATTATGGTCCTGGTGACACGCCGGCCTGTGGCGTACCTTCACCTGCGATGGGGAGTGTCCAAACCAAAGTTTGCCGCTGTCCATGCGGCATGTCTATCCGTTGTTGCAGcactgctcctcttcctcctaccAGCGGTAGTGTTCTGCAGGCTGGAGCCTCTATGGAGCTACCTGGAGTCCCTCTACTTCTGCTTCATCTCGCTTACTACAATTGGCCTAGGAGACTATGTACCTGGAGAGACTCACAATACCGTTCCCAACTCTCACCGCACGCTATATAAGCTGGCTATTACACTGTACCTGTTGCTTGGCTTGGTGTGTctgttggtggtggtggagacGTGTTGTGAGCTGCCACAGCTGAAGAGCTTCAGGAGGATATTCTACAGAGAAAATAAAGCTCCAgagtcagagaccagagaccaggagGAGTTTAGCAGCACAGAACATGATCAAATGACTGACCACCTAACTGATCAGCTGACCATCTCCTCAGTGTCCGCCCAGGCCGCCTCCCTCCGCCAGGACAACACAACCTGGCAATAGCATAAAATAGATACTTCACTGTGTATTGATGAGAatggaaatgtgtcttctgcctCTTCTGCCTTATGCCCCCCCATTGTCAGTCCTGCAATTCCAGAGGTCACCAACAGATATTTTTGCTTAACCCTCAACTGGTAATGAAAAACCTGCAAAAGTattttaaaaatgaaaaatatatataaaaacacgtCACAATTGCAAGAAAGATGTACAATATTTACAGAGCTCTATGCCAAGGCTTCCTCACAGGTGAAAAGTGATTGCACATTTTGAAACCATGCAGCCTCCCGGTTGAGGGTTGCGGTGTGAGCCGTGTACCCTGTTCAAAGCGGCTGGCGAAGTCTGCTCAAAACAAATTGTCGTATGTAAAGCACGTGGAGAAGGGGGAGACCAAGGTTGGTTGTCACACGGATTGGTTGTCACAGTGCTTATAGAGAGCAATGGTAATGCCGTTTTTTGTAGACACCAACTCCGCCAAGGCTCGTTGGCCAAGCCTATCGGAAATTCATtcggcctcagaaattgcagcccaaataaatgcttcacagagttcaagtaaagacacatctcaacatcaactgtcccgaggagactgaatcaggctttcatggtaaaattgctgcaaagaaaccactactgaaggacaccaataataagaag

Function

NR:

description
potassium channel subfamily K member 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021612175.2 True 1934 mRNA 0.49 3 26599030 26602934

Neighbor

gene id symbol gene type direction distance location
LOC110529713 l3hypdh coding downstream 2292 26591530 ~ 26596738 (-)
LOC110529710 LOC106571501 coding downstream 135669 26444117 ~ 26463361 (-)
cenpw LOC106571497 coding downstream 168142 26428702 ~ 26430888 (-)
LOC110529708 LOC106571496 coding downstream 172956 26422495 ~ 26426074 (-)
LOC110529703 LOC106571490 coding downstream 423391 26172446 ~ 26175639 (-)
LOC110529723 NA coding upstream 568004 27170938 ~ 27186859 (-)
esr2a erb1 coding upstream 641625 27244559 ~ 27284491 (-)
LOC110529724 NA coding upstream 684181 27287115 ~ 27308032 (-)
LOC110529221 NA coding upstream 1012066 27615000 ~ 27616094 (-)
brf1b LOC106571710 coding upstream 1221216 27824150 ~ 27951450 (-)
G690801 LOC106571494 non-coding downstream 213304 26384583 ~ 26385726 (-)
G690783 NA non-coding downstream 237715 26361027 ~ 26361315 (-)
G690780 NA non-coding downstream 242478 26356322 ~ 26356552 (-)
G690776 NA non-coding downstream 246291 26352414 ~ 26352739 (-)
G691008 NA non-coding upstream 112283 26715217 ~ 26715507 (-)
G691010 NA non-coding upstream 116710 26719644 ~ 26719843 (-)
G691038 NA non-coding upstream 155206 26758140 ~ 26766768 (-)
G691054 NA non-coding upstream 191475 26794409 ~ 26794617 (-)
G691056 NA non-coding upstream 191903 26794837 ~ 26795095 (-)
G690073 NA other downstream 607887 25990678 ~ 25991143 (-)
G690033 NA other downstream 633537 25965179 ~ 25965493 (-)
LOC110529694 LOC106571481 other downstream 793555 25801320 ~ 25805570 (-)
G689810 LOC106571475 other downstream 934365 25664165 ~ 25664665 (-)
G691447 LOC106571509 other upstream 261276 26864210 ~ 26868078 (-)
G691747 NA other upstream 712634 27315568 ~ 27315935 (-)
G692859 NA other upstream 1512802 28115736 ~ 28116048 (-)
si:dkey-85n7.8 NA other upstream 1875883 28478817 ~ 28481944 (-)
G693383 btbd7 other upstream 1990407 28593341 ~ 28594431 (-)

Expression


Co-expression Network