XLOC_025832 (AL772300.1)


Basic Information

Item Value
gene id XLOC_025832
gene name AL772300.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 58469935 ~ 58470519 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00050707
agcattaatgaatattaatgaagttgctcaatagagcgtgctgattggtttgaaccaagccttactcatgcattaatgcagcacactctgagacgtaatacggtactcccaggtacagacgttcAGTCTACATGCTGTAATACAAGCTAAGAtttcatggccgtgacgcagcttcaaaaattagtttcaaaccggaagtacgaatttgctcaaaataacgcaaaaaacaaccaatttacactttttagtgaaatataggtgtcctaatagtgtttttagtagtgtgggacacatatacgactgtcaacagctcaaaacatgtgttttggtgtttcgtgaccctttaaatataaaatgtcattttgtggTTGAACAATCAATccgaatatatacacacacattaatattaaGCTAGGAAAGCTGTAAGGTGTTTTACTAATTAAATGAATTTGACATTGAATGGATTTTTGTGCCTTTTACATTTGATTCActgttttttatgtatgtatttattagttCGGTAAGTGGACAAATGGTTGTTGTTGCTTGTTATGTTCTTTAAGGCAATAAACTTGACCTACTTTG

Function

GO:

id name namespace
GO:0090085 regulation of protein deubiquitination biological_process

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000097343

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00050707 True 585 lncRNA 0.35 1 58469935 58470519

Neighbor

gene id symbol gene type direction distance location
XLOC_025831 zgc:171489 coding upstream 1100 58455428 ~ 58468835 (+)
XLOC_025830 NA coding upstream 40811 58425000 ~ 58429124 (+)
XLOC_025829 sdr42e2 coding upstream 52967 58379450 ~ 58416968 (+)
XLOC_025828 vwa3a coding upstream 97284 58354852 ~ 58372651 (+)
XLOC_025827 AL772300.2 coding upstream 116348 58344862 ~ 58353587 (+)
XLOC_025833 si:ch211-165g14.1 coding downstream 1786 58472305 ~ 58487848 (+)
XLOC_025834 NA coding downstream 83911 58554430 ~ 58595650 (+)
XLOC_025835 NA coding downstream 110070 58580589 ~ 58615939 (+)
XLOC_025836 NA coding downstream 117685 58588204 ~ 58624381 (+)
XLOC_025837 NA coding downstream 184005 58654524 ~ 58680069 (+)
XLOC_025429 BX649540.1 misc upstream 28220899 30248739 ~ 30249036 (+)
XLOC_025826 NA non-coding upstream 164057 58300038 ~ 58305878 (+)
XLOC_025824 NA non-coding upstream 257249 58210375 ~ 58212686 (+)
XLOC_025823 NA non-coding upstream 276075 58188654 ~ 58193860 (+)
XLOC_025841 CU571382.1 non-coding downstream 197455 58667974 ~ 58669493 (+)

Expression


Co-expression Network