XLOC_025836


Basic Information

Item Value
gene id XLOC_025836
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 58588204 ~ 58624381 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00052826
CCATGACTGAAACTGATTGTTGGAAAAATTGAGAGCACTGAGTGAAAAGCCATACAAAATCAACCCCACACACTAAAATGCTCAGAACGCACACATTTACTACCATCTAAAGATCTAAAGTCATACTCACGTGCAAATTGACCAGGGAATATTTGTATGTCTGGGTGACCAGTGGAGAGTTTGAGGTGAAACTGAGGAACAGTGTGGGGAGATGGAGAATCCTGCTGGATGCGAAGGGGTGAAGGGTCTGGATACAGACAGAGACCCTGAAGACTGTGGTGGAGCTGGTGGGTTGACAGACCAAGCTGGAGCCTGCGGGACGAATGACCATTGAGAAGAccaccactgagccactgcatcCATAAGCTGAGCTGGAGAAACAGGCCTGAAGGTCTGCAGTGAAGCTTGATGATTGTGAGGCCAGAGCTGAGATCTTGTCTCATTCATCCATAGTTCATTTTCAAAAGACCAGGGCTGAGGTCTTGTCTCGTTCCTCTGTTGTTCACTTTCATGAAGCCAGGGCTGAGATCTTGTCTCGTTCCTCTGTTGTTCACTTTCATGAGGCCAGGGCTGAGGTCTTGTCTCGTTCCTCTGTTGTTCACTTTCATGAGGCCAGGGCTGAGGTCTTGTCTCGTTCCTCCATAGTTCACTTTCATGAGGCCAGGGCTGAGGTCTTGTCTCATTCCTCCATAGTTCACTTTCATGAGGCCAGAGCTGTTGTCCTGTTTGCTTCATCCATAGATCACT

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00052826 True 747 lncRNA 0.48 2 58588204 58624381

Neighbor

gene id symbol gene type direction distance location
XLOC_025833 si:ch211-165g14.1 coding upstream 100356 58472305 ~ 58487848 (+)
XLOC_025832 AL772300.1 coding upstream 117685 58469935 ~ 58470519 (+)
XLOC_025831 zgc:171489 coding upstream 119369 58455428 ~ 58468835 (+)
XLOC_025830 NA coding upstream 159080 58425000 ~ 58429124 (+)
XLOC_025829 sdr42e2 coding upstream 171236 58379450 ~ 58416968 (+)
XLOC_025837 NA coding downstream 30143 58654524 ~ 58680069 (+)
XLOC_025838 FP016018.4 coding downstream 30994 58655375 ~ 58659343 (+)
XLOC_025839 FP016018.1 coding downstream 31931 58656312 ~ 58656994 (+)
XLOC_025840 CU571382.4 coding downstream 39561 58663942 ~ 58665324 (+)
XLOC_025841 CU571382.1 coding downstream 43593 58667974 ~ 58669493 (+)
XLOC_025429 BX649540.1 misc upstream 28339168 30248739 ~ 30249036 (+)
XLOC_025827 AL772300.2 non-coding upstream 234617 58344862 ~ 58353587 (+)
XLOC_025826 NA non-coding upstream 282326 58300038 ~ 58305878 (+)
XLOC_025824 NA non-coding upstream 375518 58210375 ~ 58212686 (+)
XLOC_025842 CU571382.1 non-coding downstream 45193 58669574 ~ 58673206 (+)
XLOC_025843 NA non-coding downstream 58176 58682557 ~ 58682886 (+)
XLOC_025844 CU571382.5 non-coding downstream 69795 58694176 ~ 58695037 (+)

Expression


Co-expression Network