XLOC_025933


Basic Information

Item Value
gene id XLOC_025933
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 562096 ~ 576862 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00052884
CTCAATGCTGTCAGtaaaaaacaacatgaaatgaTGCACAGCATGAACTGCGATTACACTCATAGAGAACTGAGCTGCCCtgtgctgtttatttgtttgctaatgTTTACTTTATCATTAACTGTGTAatacaattcatttattttgtgtttatatgtatttccTCATCATTCTGGTCTTTATATTATTAGAGTTTAACATTATGACAGATTCTCTAGACCCTTAAGTGACTGTTTGTCAGTGTCTGTAATTATTTCTGTAGATTAAAGATGAATTTGACAGTGACTGTTCCAacg

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00052884 True 296 lncRNA 0.33 2 562096 576862

Neighbor

gene id symbol gene type direction distance location
XLOC_025931 si:dkey-12f6.5 coding downstream 39967 495748 ~ 522129 (-)
XLOC_025930 NA coding downstream 119888 439917 ~ 442208 (-)
XLOC_025929 CU394254.2 coding downstream 156486 402886 ~ 405610 (-)
XLOC_025928 mhc1zja coding downstream 159356 383848 ~ 402740 (-)
XLOC_025927 mhc1zaa coding downstream 194691 346530 ~ 367405 (-)
XLOC_025934 dicp1.1 coding upstream 3489 580351 ~ 584950 (-)
XLOC_025935 CR792453.1 coding upstream 52845 629707 ~ 631636 (-)
XLOC_025936 NA coding upstream 88253 665115 ~ 688868 (-)
XLOC_025937 AL929520.2 coding upstream 143360 720222 ~ 722125 (-)
XLOC_025938 NA coding upstream 395679 972541 ~ 972799 (-)
XLOC_025926 CU394254.1 non-coding downstream 217159 344817 ~ 344937 (-)
XLOC_025924 CABZ01089980.1 non-coding downstream 239698 314376 ~ 322398 (-)
XLOC_025923 NA non-coding downstream 261469 292774 ~ 300627 (-)
XLOC_025939 NA non-coding upstream 434618 1011480 ~ 1028413 (-)

Expression


Co-expression Network