Gene
RNA
| Item | Value |
|---|---|
| gene id | G664739 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 2008388 ~ 2065730 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU756710 | False | 220 | lncRNA | 0.40 | 2 | 2008388 | 2065730 |
| TU756709 | True | 405 | lncRNA | 0.41 | 3 | 2064899 | 2065730 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110529244 | NA | coding | downstream | 37924 | 1968290 ~ 1975576 (-) |
| tbx18 | LOC106571000 | coding | downstream | 179994 | 1807585 ~ 1828394 (-) |
| armc1l | LOC106571055 | coding | downstream | 509688 | 1479450 ~ 1498700 (-) |
| LOC110518775 | LOC106592749 | coding | downstream | 544721 | 1423487 ~ 1463667 (-) |
| LOC118965590 | NA | coding | downstream | 583397 | 1423487 ~ 1424991 (-) |
| LOC110531067 | dnmt3a | coding | upstream | 44330 | 2110060 ~ 2200907 (-) |
| LOC110529239 | LOC105018054 | coding | upstream | 168255 | 2233985 ~ 2278437 (-) |
| LOC110529255 | rps12 | coding | upstream | 881285 | 2947015 ~ 2957275 (-) |
| LOC118965659 | NA | coding | upstream | 890894 | 2956624 ~ 2956701 (-) |
| ccm2 | ccm2 | coding | upstream | 1015482 | 3081212 ~ 3120444 (-) |
| G664737 | NA | non-coding | downstream | 1234 | 2006732 ~ 2007154 (-) |
| G664729 | NA | non-coding | downstream | 21091 | 1987041 ~ 1987297 (-) |
| G664725 | NA | non-coding | downstream | 41761 | 1966402 ~ 1966627 (-) |
| G664711 | NA | non-coding | downstream | 57653 | 1950505 ~ 1950735 (-) |
| G664778 | NA | non-coding | upstream | 74 | 2065804 ~ 2066300 (-) |
| G664781 | NA | non-coding | upstream | 5166 | 2070896 ~ 2071168 (-) |
| G664782 | NA | non-coding | upstream | 5533 | 2071263 ~ 2071587 (-) |
| G664788 | NA | non-coding | upstream | 28150 | 2093880 ~ 2094188 (-) |
| G664796 | NA | non-coding | upstream | 46875 | 2112605 ~ 2113415 (-) |
| G664733 | NA | other | downstream | 13858 | 1993889 ~ 1994530 (-) |
| G664089 | NA | other | downstream | 569947 | 1437760 ~ 1438441 (-) |
| G663235 | NA | other | downstream | 1578130 | 428191 ~ 430258 (-) |
| G663215 | NA | other | downstream | 1621406 | 381322 ~ 388193 (-) |
| G664763 | rab10 | other | upstream | 225672 | 2291402 ~ 2350981 (-) |
| G665603 | NA | other | upstream | 1171158 | 3236888 ~ 3240052 (-) |
| G665655 | NA | other | upstream | 1274326 | 3340056 ~ 3340960 (-) |
| G665718 | NA | other | upstream | 1351383 | 3417113 ~ 3418288 (-) |
| G665797 | NA | other | upstream | 1455060 | 3520790 ~ 3521623 (-) |
