G671290


Basic Information

Item Value
gene id G671290
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 9641232 ~ 9642152 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU764711
gaacacttaccacgctgcgcattggtcctccgatccttcctactactcctcgtcagaggaggaaggagaccGTTACACTAACGGCGAATAAGCTATAAAAAAAATAGAGTCTTCTTCAGGATGAAGGCACAGAGATGCCGAAACATTGGTGATTTACTCAATGAATTACGGGAGTTTATATATAGACTGTGCGACTCTCTTTATTATAGCTTATGGTTAAGTGACAACTACTTTGTAAACACTAACTTTAATTTTCATGTTTCGGCAAAGCCTTCAAGGAACCTATGTTTTTCAGGAGCCTAAATCAAGAGAATTAAATGGGAGAAAGCTGCTTTTCAATCAGAAAAACAACACTGTGTTCCAGCAACATTGTACCCGGGACTAATGAACGTATAAAGAATACAAAAAGGTTAGCTGTGCAGGAATAATGTGGTGTTTCCACAGTGCAGGTTTGATATAATCTGGTCCTCAGGGTGAGAATCTATGCGTCTCCTCCTGAGTACTGCTCTAGAGCAGAGTTTCacaaacttggtcctggggcccctctgggtgcacgttttagtttctgcactacacagctgattaaaaatAACTCTtcgtcaagctttgattatttgaatccaCTGTGTCGTGCTAGGGCAGAAGTTTGGGGAAACGTTACTCTTGGAGGTGAATCACTGATCAAAAGGCCTAaacaagataaatgttttaaacagTTTTAAAACCGTTCAGATCTGGCTTAAATCATTTTTATCCATTGGTATACCTTCATTGATACCAGCGAAAACAAAACTATTTTATATTTCCACCAGGAAATAAAgcctattgttattttttacttttttacaATGTCTATTTGAATATAGTGATATTTCTTAAGAGGTTGGGTGCAACACTGAAAAACTGCAATAAAGACATGGG
>TU764712
gaccGTTACACTAACGGCGAATAAGCTATAAAAAAAATAGAGTCTTCTTCAGGATGAAGGCACAGAGATGCCGAAACATTGGTGATTTACTCAATGAATTACGGGAGTTTATATATAGACTGTGCGACTCTCTTTATTATAGCTTATGGTTAAGTGACAACTACTTTGTAAACACTAACTTTAATTTTCATGTTTCGGCAAAGCCTTCAAGGAACCTATGTTTTTCAGGAGCCTAAATCAAGAGAATTAAATGGGAGAAAGCTGCTTTTCAATCAGAAAAACAACACTGTGTTCCAGCAACATTGTACCCGGGACTAATGAACGTATAAAGAATACAAAAAGGTTAGCTGTGCAGGAATAATGTGGTGTTTCCACAGTGCAGGTTTGATATAATCTGGTCCTCAGGGTGAGAATCTATGCGTCTCCTCCTGAGTACTGCTCTAGAGCAGAGTTTCacaaacttggtcctggggcccctctgggtgcacgttttagtttctgcactacacagctgattaaaaatAACTCTtcgtcaagctttgattatttgaatccaCTGTGTCGTGCTAGGGCAGAAGTTTGGGGAAACGTTACTCTTGGAGGTGAATCACTGATCAAAAGGCCTAaacaagataaatgttttaaacagTTTTAAAACCGTTCAGATCTGGCTTAAATCATTTTTATCCATTGGTATACCTTCATTGATACCAGCGAAAACAAAACTATTTTATATTTCCACCAGGAAATAAAgcctattgttattttttacttttttacaATGTCTATTTGAATATAGTGATATTTCTTAAGAGGTTGGGTGCAACACTGAAAAACTGCAATAAAGACATGGG

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU764711 False 921 lncRNA 0.39 1 9641232 9642152
TU764712 True 854 lncRNA 0.38 1 9641232 9642085

Neighbor

gene id symbol gene type direction distance location
LOC100301659 LOC100301659 coding downstream 108580 9525869 ~ 9532652 (-)
cdc42bpb LOC106571112 coding downstream 515997 9012231 ~ 9125235 (-)
LOC110529323 LOC106571110 coding downstream 641538 8989445 ~ 8999694 (-)
LOC118965490 LOC106571111 coding downstream 761304 8864199 ~ 8879928 (-)
LOC110529325 LOC106571107 coding downstream 778242 8758081 ~ 8862990 (-)
LOC110529336 LOC106571151 coding upstream 2373 9644525 ~ 9650080 (-)
LOC118965597 NA coding upstream 131853 9774005 ~ 9791069 (-)
kif26aa LOC106571127 coding upstream 183830 9825982 ~ 10013023 (-)
LOC110529344 LOC106571131 coding upstream 438685 10080837 ~ 10086410 (-)
myh6 LOC102786665 coding upstream 498517 10140669 ~ 10148583 (-)
G671172 NA non-coding downstream 139626 9443905 ~ 9501606 (-)
G671192 NA non-coding downstream 173596 9467356 ~ 9467636 (-)
G671181 NA non-coding downstream 184824 9456012 ~ 9456408 (-)
G671095 LOC106571119 non-coding downstream 288390 9298636 ~ 9352842 (-)
G670917 NA non-coding downstream 363261 9277716 ~ 9277971 (-)
G671335 NA non-coding upstream 17540 9659692 ~ 9660139 (-)
G671358 NA non-coding upstream 53621 9695773 ~ 9696915 (-)
G671380 NA non-coding upstream 70413 9712565 ~ 9712780 (-)
G671431 NA non-coding upstream 106803 9748955 ~ 9749234 (-)
G671438 NA non-coding upstream 112212 9754364 ~ 9754572 (-)
G671122 NA other downstream 293353 9346384 ~ 9347879 (-)
G670905 NA other downstream 376139 9263850 ~ 9265093 (-)
G670733 LOC107575789 other downstream 679501 8949694 ~ 8961731 (-)
G670549 NA other downstream 1063452 8577051 ~ 8577780 (-)
G670097 NA other downstream 1299112 8340990 ~ 8342120 (-)
G671820 NA other upstream 472938 10034772 ~ 10121973 (-)
G672436 LOC107575789 other upstream 1096072 10738224 ~ 10738686 (-)
G673053 NA other upstream 1702321 11344473 ~ 11344782 (-)
LOC110529377 LOC106571175 other upstream 2342682 11984834 ~ 11997491 (-)

Expression


Co-expression Network