G708449


Basic Information

Item Value
gene id G708449
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 41360453 ~ 41362488 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU805564
cctgtcctgccctgtcttgtcctgtcttgtcctgccctgtcttgtcctgtcctgccctgtcttgtcctgtcttgtcctgccctgtcttgtcctgtcctgccctgtcttgtcttgtcctgtcttgccctgtcttgtcctgccctgtcttgtcctgccctgtcttgtcctgccctgtcttgtcctgccttgtcctgccctgtcttgtcctgccctgtcttgtcctgccctgtcttgtcctgccctgtcctgccctgtcctgtcttgtcctgtcttgtcctgccctgtcttgtcttgtcttgtcctgtcttgtcttgtcttgtcctgtcctgtcctgtcctgccctgccctgccctgccctgccctgccctgccttgccttgccttgccttgccttgccttgccttgtcttgtcttgtcttgtcttgtcctgtcctgtgctgccctgacctgccctgccctgccctgtcttgtcctgtcctgccctgtcttgtcctgccttgtcctgccctgtcttgtcctgccctgtcttgtcttgtcctgccctgccttgtcctgccctgccttgtcttgtcctgccctgtcttgtcctgccctgtcttgtcttgtcctgtcttgtcctgccctgccttgtcttgtcctgccctgtcttgtcctgccctgtcttgtcttgtcctgtcctgtcctgtcttgtcttgtcctgtcttgtcttgtcctgtcttgtcctgccctgtcttgtcctgccctgtcttgtcttgtcttgtcttgtcctgccctgtcttgtcctgtcctgccctgccctgccctgccctgtcttgtcctgtcctgtcctgtcttgtcttgtcctgtcttgtcctgccttgtcttgtcctgccctgtcttgtcctgccttgtcttgtcctgccctgtcttgtcctgccctgtcttgtcctgccctgtcttgtcctgccctgtcttgtcctgtcctgtcttgtcctgccctgtcttgtcctgtcttgtcctgccctgtcttgtcctgtcctgtcttgccctgtcttgtcctgccctgtcttgtcctgccttgtcttgtcctgtcttgtcctgccctgtcttgtcctgtcctgccctgtcttgtcctgtcttgtcctttcttgtc

Function

NR:

description
PREDICTED: aggrecan core protein-like isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU805564 True 1131 lncRNA 0.58 2 41360453 41362488

Neighbor

gene id symbol gene type direction distance location
LOC110529916 LOC106571797 coding downstream 390975 40958142 ~ 40969478 (-)
LOC118965517 NA coding downstream 560416 40779851 ~ 40800037 (-)
LOC110529912 LOC106571799 coding downstream 580822 40724397 ~ 40779631 (-)
armc2 armc2 coding downstream 690952 40638271 ~ 40669501 (-)
LOC118965516 LOC106588149 coding downstream 1215260 40143911 ~ 40145193 (-)
LOC118965611 NA coding upstream 363033 41725469 ~ 41728987 (-)
klhl18 klhl18 coding upstream 978194 42340682 ~ 42420087 (-)
puf60a puf60 coding upstream 1069303 42431791 ~ 42526586 (-)
mycb myc coding upstream 2237266 43599754 ~ 43602305 (-)
LOC118965613 NA coding upstream 2396841 43759329 ~ 43763318 (-)
G708437 NA non-coding downstream 6756 41330406 ~ 41353697 (-)
G708441 NA non-coding downstream 7667 41347871 ~ 41352786 (-)
G708438 NA non-coding downstream 16114 41331162 ~ 41344339 (-)
G708422 NA non-coding downstream 40670 41319120 ~ 41319783 (-)
G708412 NA non-coding downstream 52284 41307647 ~ 41308169 (-)
G708452 NA non-coding upstream 970 41363458 ~ 41376326 (-)
G708453 NA non-coding upstream 13502 41375990 ~ 41383342 (-)
G708458 NA non-coding upstream 29583 41392071 ~ 41392482 (-)
G708460 NA non-coding upstream 30514 41393002 ~ 41393431 (-)
G708652 NA non-coding upstream 32448 41394936 ~ 41396213 (-)
slc22a16 LOC106571810 other downstream 1400840 39956961 ~ 40017167 (-)
G706683 stxbp5 other downstream 2134140 39219644 ~ 39226313 (-)
G704874 NA other downstream 3046650 38313489 ~ 38313803 (-)
G704702 NA other downstream 3322107 38037725 ~ 38038346 (-)
LOC110530908 otof other downstream 3868296 37474229 ~ 37626960 (-)
G709272 NA other upstream 1357283 42719771 ~ 42720699 (-)
G709454 NA other upstream 1808272 43170760 ~ 43171082 (-)
G711133 NA other upstream 3176305 44538793 ~ 44539504 (-)
G712814 NA other upstream 4095289 45457777 ~ 45458248 (-)
crfb16 LOC106568648 other upstream 4948642 46309732 ~ 46325685 (-)

Expression


Co-expression Network