G708738


Basic Information

Item Value
gene id G708738
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 41754445 ~ 41762538 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU805975
ttcaaccatagtgttgttaaatatgaacattaaatggttttattgttttgttaaaggaaaggaaaaacctaaaagtagtgctgtaacacatagcctacgctgtaatatgttaaatgtatattgaggaaccataatcactactactggataattgataggtacagtagtgaactgaagggttgtcccaacttgttcaaatcattataataccactactaataatagttaaaagcagtgccccttatcagtccagtatgtgtgcaggtatatgtgcttacacccagcctttcttggtattgctggttgtagtacatatacctgcatacatactggacagtataggtggcaatggtactgtatatggggtgcaacaaacttacctgagactccctgtctctgccagtctgtccctggatatctgtccccagttctgctgtctgtgtgccatctgccctagcaggggctaaaatctgatatcaactttggaggggacaattacatgacattttctcaagagcaattcctgaaaaaacaccaaaagtagtgctgtaacacatagcctacgctgtaatatgttaaatgtatattgaggaaccataatcactactactggttaattgataggtacagtagtgaactgaagggttgtcccaacttgttcaaatcattataatactactactaataatagttaaaagcagtgttccttatcagtccagtatgtatgcaggtatatgtgtatatgtacatatacctacatacatactggactgataaggaacactgcttttaactattattactgtccagtatgtatgcacgtatatgtactacaaccagcaataccaagaaaggctggttgtagcacatatacctgcacacatactggactgataaggaacactgctttaactattattagtagtagtattataatgatttgaccaagttgggacaacccttcagttcactactgtacctatcaattatccagtagtagtgattatggttcctcaatatacatttaacatattacagcgtaggctatgtgttacagcactacttttggtgttttttcaggaattgctcttgagaaaatgtcatgtaattgtcccctccaaagttgatatcagattttagcccctgctagggcagactgcacacagacagcagaactggggacagatatgcaggggcagactggcagagacagggagtctcaggtaagtttgttgcaccccatatacagtcagtgtacagtaccattgccacctactgtccagtatgtatgccggtatatgtacta

Function

NR:

description
PREDICTED: basic immunoglobulin-like variable motif-containing protein isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU805975 True 1306 lncRNA 0.39 2 41754445 41762538

Neighbor

gene id symbol gene type direction distance location
LOC118965611 NA coding downstream 25458 41725469 ~ 41728987 (-)
LOC110529916 LOC106571797 coding downstream 784967 40958142 ~ 40969478 (-)
LOC118965517 NA coding downstream 954408 40779851 ~ 40800037 (-)
LOC110529912 LOC106571799 coding downstream 974814 40724397 ~ 40779631 (-)
armc2 armc2 coding downstream 1084944 40638271 ~ 40669501 (-)
klhl18 klhl18 coding upstream 578144 42340682 ~ 42420087 (-)
puf60a puf60 coding upstream 669253 42431791 ~ 42526586 (-)
mycb myc coding upstream 1837216 43599754 ~ 43602305 (-)
LOC118965613 NA coding upstream 1996791 43759329 ~ 43763318 (-)
efr3a efr3a coding upstream 2422455 44184993 ~ 44436559 (-)
G708729 NA non-coding downstream 31878 41705704 ~ 41722567 (-)
G708716 NA non-coding downstream 72447 41678186 ~ 41681998 (-)
G708715 NA non-coding downstream 73728 41676777 ~ 41680717 (-)
G708707 NA non-coding downstream 114390 41620080 ~ 41640055 (-)
G708758 NA non-coding upstream 88363 41850901 ~ 41867282 (-)
G708761 NA non-coding upstream 107896 41870434 ~ 41884426 (-)
G708762 NA non-coding upstream 120813 41883351 ~ 41931521 (-)
G708764 NA non-coding upstream 149047 41911585 ~ 41929952 (-)
G708769 NA non-coding upstream 170001 41932539 ~ 41942456 (-)
slc22a16 LOC106571810 other downstream 1794832 39956961 ~ 40017167 (-)
G706683 stxbp5 other downstream 2528132 39219644 ~ 39226313 (-)
G704874 NA other downstream 3440642 38313489 ~ 38313803 (-)
G704702 NA other downstream 3716099 38037725 ~ 38038346 (-)
LOC110530908 otof other downstream 4262288 37474229 ~ 37626960 (-)
G709272 NA other upstream 957233 42719771 ~ 42720699 (-)
G709454 NA other upstream 1408222 43170760 ~ 43171082 (-)
G711133 NA other upstream 2776255 44538793 ~ 44539504 (-)
G712814 NA other upstream 3695239 45457777 ~ 45458248 (-)
crfb16 LOC106568648 other upstream 4548592 46309732 ~ 46325685 (-)

Expression


Co-expression Network