LOC110531983


Basic Information

Item Value
gene id LOC110531983
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 36935061 ~ 36937214 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_002474793.2
ttcccgcggctatgcgTGCTGGACGGTGCCTGAACCCGCCTTGTTGGTTCTTGACTGGGGTTAGCTAGCTAGAATTAGAGCCTTCTGGCTAGCCTGTAATTTATGGTTGTAATTACGTTGTGTAACAGCAAAATGTCTATGTACTTGTCATTTGGTTGTAACTAACGTTTGTTTAAATTGGCTAGCTAATGTTTTGAAGAGAACAGGCTAGCGCCCTGTAGAATCTAGACCAGAGTGGATGCCCAGATGTGAGGCTGATGCAGTGCCCAGATGAGATGAGAGCAATCTTCTACAGAATCTGCCAAACACAACTCTGTCTCTGACAGCTTCTCCCTGTGCTGACCACCGATGGATCTTACACATGAGAGCTGCCGTTGATGGACTCCTGGTCAAGCAACACAGGGAGAAAGACATCCTGAAGCGGGTGGATGGGACATACAGCTCTACCACCAGTGTCATGACTGTGTCATTAGCTGCCACAGCTAAACTAATTTACTCATGTTTATTGCACCATatagtatgtttttttttatccataCAAGATCTAGGGCAACTCTGCCTCAGAGTGGTTGGCTAAGCTCCttcctggttggccctgtccgttGAACAGCACCAGTGTCTCACAACCCCTCTGTCTCAGTCAccagtaattatgctgcaatagtttgtaccgggggctagggtcagctTTTCTTATCTGGTGTACTGTGTGTTCTTAGGCATACTCTCACTAATCCCCTCCATTTGTCAACAACAGCTTCAACACATCATAGCAACATGCTTGACTGAAAATCTTTAAACATGTTTATAGacttcagtggaggctgctgaggggaggacggctcataataatgtctggaatggagtcaatggaatggtatcaaatgtgatttccatgtggttgataccattccattgaatCCATTACtgtgagccatcctcccctcagcagcctccactgatagacTTTATGGAGGTGATGCTGTTGCCCATCAAATTTCATATGTTATGCCAATATGTCAAAGTTCTCAATTAGGAAGATGATGTTCAGAATGACATGTTCATGACTGTTGATGTTCACAGGACTCTCCAATGCTATGTTGAACGAGCACCACAGATGAAAGCAGATAgcttctctctaccacaccttCACCAAGTCATCCAATTTTTGCTTCATTTTCTAAAATAATTACAGAATTCATTTTGTTtctaatagttttttttatgctAGATGTGAGTTTATTTAGCAGGTCTATAATGTATTGTTTTGGAATGTTATTAAATATATACTCAGTCACAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_002474793.2 True 1300 mRNA 0.43 2 36935061 36937214

Neighbor

gene id symbol gene type direction distance location
trnap-agg-150 NA coding upstream 322718 36612272 ~ 36612343 (+)
trnap-agg-149 NA coding upstream 324121 36610867 ~ 36622475 (+)
trnap-agg-148 NA coding upstream 325523 36609467 ~ 36609538 (+)
trnap-agg-147 NA coding upstream 326925 36608065 ~ 36608136 (+)
trnap-agg-146 NA coding upstream 329729 36605261 ~ 36605332 (+)
adtrp1 LOC106571895 coding downstream 634 36937848 ~ 36942240 (+)
LOC110531160 LOC106571896 coding downstream 4295 36941509 ~ 36953375 (+)
LOC110531987 LOC106571899 coding downstream 24101 36961315 ~ 36970867 (+)
LOC118966039 NA coding downstream 93546 37030760 ~ 37063684 (+)
nup210 LOC106571901 coding downstream 165425 37102639 ~ 37166005 (+)
G799457 LOC106571893 non-coding upstream 101298 36827899 ~ 36833763 (+)
G799347 NA non-coding upstream 114460 36820050 ~ 36820601 (+)
G799342 NA non-coding upstream 130247 36804533 ~ 36804814 (+)
G799341 NA non-coding upstream 130574 36804262 ~ 36804487 (+)
G799331 NA non-coding upstream 144961 36789804 ~ 36790100 (+)
G799536 NA non-coding downstream 42307 36979521 ~ 36979856 (+)
G799573 NA non-coding downstream 85008 37022222 ~ 37022581 (+)
G799590 NA non-coding downstream 88413 37025627 ~ 37025884 (+)
G799582 LOC106571900 non-coding downstream 109504 37046718 ~ 37048303 (+)
G799626 NA non-coding downstream 157542 37094756 ~ 37094961 (+)
G799053 NA other upstream 618256 36313129 ~ 36316805 (+)
G797932 pphln other upstream 1562913 35364988 ~ 35372148 (+)
G797056 NA other upstream 2378439 34555931 ~ 34556622 (+)
G796495 LOC106613263 other upstream 2813321 34121422 ~ 34121740 (+)
G794886 LOC106577459 other upstream 4347673 32583606 ~ 32587388 (+)
G799578 LOC106571900 other downstream 97204 37034418 ~ 37035918 (+)
G799858 LOC106571908 other downstream 630031 37567245 ~ 37570411 (+)
G800834 NA other downstream 1133002 38070216 ~ 38071433 (+)
G801778 NA other downstream 1850847 38788061 ~ 38788354 (+)
G801851 NA other downstream 1995738 38932952 ~ 38933868 (+)

Expression


Co-expression Network