G799536


Basic Information

Item Value
gene id G799536
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 36979521 ~ 36979856 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU910006
ggtcacaaaaaaaaaaaaattgggcgtgcaaaattattcagcccccttaagttaatactttgtagcgccaccttttgctgcgattacagctgtaagtcgcttggggtatgtctctatcagttttgcacatcgagagactgacattttttcccattcctacttgcaaaacagctcgagctcagtgaggttggatggagagcatttgtgaacagcagttttcagttctttccacagattctcgattggattcaggtctggactttgacttggccattctaacacctggatatgtttatttttgaaccattccattgtagattttgctttatgctttgg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU910006 True 336 lncRNA 0.41 1 36979521 36979856

Neighbor

gene id symbol gene type direction distance location
LOC110531987 LOC106571899 coding upstream 8654 36961315 ~ 36970867 (+)
LOC110531160 LOC106571896 coding upstream 26146 36941509 ~ 36953375 (+)
adtrp1 LOC106571895 coding upstream 37281 36937848 ~ 36942240 (+)
LOC110531983 NA coding upstream 42307 36935061 ~ 36937214 (+)
trnap-agg-150 NA coding upstream 367178 36612272 ~ 36612343 (+)
LOC118966039 NA coding downstream 50904 37030760 ~ 37063684 (+)
nup210 LOC106571901 coding downstream 122783 37102639 ~ 37166005 (+)
iqsec1a LOC106571902 coding downstream 200034 37179890 ~ 37360016 (+)
gp9 LOC106571903 coding downstream 382172 37362028 ~ 37364848 (+)
raf1a LOC106571905 coding downstream 400093 37379949 ~ 37424276 (+)
G799457 LOC106571893 non-coding upstream 145758 36827899 ~ 36833763 (+)
G799347 NA non-coding upstream 158920 36820050 ~ 36820601 (+)
G799342 NA non-coding upstream 174707 36804533 ~ 36804814 (+)
G799341 NA non-coding upstream 175034 36804262 ~ 36804487 (+)
G799331 NA non-coding upstream 189421 36789804 ~ 36790100 (+)
G799573 NA non-coding downstream 42366 37022222 ~ 37022581 (+)
G799590 NA non-coding downstream 45771 37025627 ~ 37025884 (+)
G799582 LOC106571900 non-coding downstream 66862 37046718 ~ 37048303 (+)
G799626 NA non-coding downstream 114900 37094756 ~ 37094961 (+)
G799630 NA non-coding downstream 120441 37100297 ~ 37100529 (+)
G799053 NA other upstream 662716 36313129 ~ 36316805 (+)
G797932 pphln other upstream 1607373 35364988 ~ 35372148 (+)
G797056 NA other upstream 2422899 34555931 ~ 34556622 (+)
G796495 LOC106613263 other upstream 2857781 34121422 ~ 34121740 (+)
G794886 LOC106577459 other upstream 4392133 32583606 ~ 32587388 (+)
G799578 LOC106571900 other downstream 54562 37034418 ~ 37035918 (+)
G799858 LOC106571908 other downstream 587389 37567245 ~ 37570411 (+)
G800834 NA other downstream 1090360 38070216 ~ 38071433 (+)
G801778 NA other downstream 1808205 38788061 ~ 38788354 (+)
G801851 NA other downstream 1953096 38932952 ~ 38933868 (+)

Expression


Co-expression Network